Strain Fitness in Escherichia coli BW25113 around b4254

Experiment: Ying_AminoAcid20 rep A; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep A; time point 3
4,474,400	-	yjgL	b4253	0.52	-0.2
4,474,456	+	yjgL	b4253	0.55	+1.5
4,475,088	+	yjgL	b4253	0.90	+2.5
4,475,127	+				+2.5
4,475,127	+				+2.5
4,475,137	+				+2.5
4,475,165	+				+2.5
4,475,175	+				+1.0
4,475,234	-				+1.5
4,475,235	+				+1.5
4,475,250	+				-0.3
4,475,267	-				+1.5
4,475,277	-				-0.5
4,475,357	-				+0.7
4,475,357	-				-0.0
4,475,361	-				+0.4
4,475,361	-				-0.5
4,475,365	-				+0.3
4,475,367	-				+2.7
4,475,367	-				+0.6
4,475,381	-				+0.2
4,475,381	-				-1.0
4,475,381	-				+0.1
4,475,414	+				+0.2
4,475,422	-				-0.5
4,475,422	-				-0.0
4,475,434	+	argI	b4254	0.10	-0.9
4,475,434	+	argI	b4254	0.10	-0.3
4,475,434	+	argI	b4254	0.10	+2.5
4,475,434	+	argI	b4254	0.10	+0.1
4,475,435	-	argI	b4254	0.10	+0.2
4,475,437	-	argI	b4254	0.11	-0.1
4,475,437	-	argI	b4254	0.11	-0.6
4,475,442	-	argI	b4254	0.11	+0.1
4,475,442	-	argI	b4254	0.11	+1.1
4,475,442	-	argI	b4254	0.11	+0.0
4,475,442	-	argI	b4254	0.11	+0.2
4,475,442	-	argI	b4254	0.11	-0.9
4,475,445	-	argI	b4254	0.11	-0.0
4,475,445	-	argI	b4254	0.11	+0.5
4,475,455	-	argI	b4254	0.12	+0.0
4,475,455	-	argI	b4254	0.12	+0.3
4,475,490	-	argI	b4254	0.16	+0.2
4,475,545	-	argI	b4254	0.21	-0.3
4,475,567	-	argI	b4254	0.24	+0.1
4,475,632	+	argI	b4254	0.30	-0.5
4,475,670	-	argI	b4254	0.34	-1.8
4,475,716	+	argI	b4254	0.38	+0.7
4,475,840	-	argI	b4254	0.51	+2.2
4,475,850	+	argI	b4254	0.52	-0.0
4,475,850	+	argI	b4254	0.52	+0.3
4,475,911	+	argI	b4254	0.58	+1.0
4,475,911	+	argI	b4254	0.58	-0.8
4,475,963	-	argI	b4254	0.63	+0.2
4,476,025	-	argI	b4254	0.69	-0.1
4,476,061	+	argI	b4254	0.73	-0.6
4,476,061	+	argI	b4254	0.73	-0.4
4,476,069	-	argI	b4254	0.74	-0.6
4,476,069	-	argI	b4254	0.74	-0.4
4,476,104	+	argI	b4254	0.77	-0.9
4,476,104	+	argI	b4254	0.77	-0.3
4,476,142	+	argI	b4254	0.81	+0.1
4,476,165	-	argI	b4254	0.83	-0.4
4,476,272	+				+0.1
4,476,272	+				-0.0
4,476,330	+				+0.4
4,476,339	-				+0.6
4,476,442	+				+0.1
4,476,466	-				+0.1
4,476,585	+	yjgD	b4255	0.21	-0.1
4,476,588	+	yjgD	b4255	0.22	-0.1
4,476,588	+	yjgD	b4255	0.22	+0.0
4,476,588	+	yjgD	b4255	0.22	+0.5
4,476,663	+	yjgD	b4255	0.40	-0.1
4,476,673	-	yjgD	b4255	0.42	-1.4
4,476,680	+	yjgD	b4255	0.44	-0.1
4,476,680	+	yjgD	b4255	0.44	+0.5
4,476,741	-	yjgD	b4255	0.59	-2.9
4,476,822	-	yjgD	b4255	0.78	-1.2
4,476,930	+				+0.9
4,476,969	+				+0.1
4,477,018	+				-0.3
4,477,042	-				-0.7
4,477,072	+				+1.1
4,477,072	+				+0.9
4,477,090	-				+0.0
4,477,090	-				+0.3
4,477,108	-	yjgM	b4256	0.10	+0.3
4,477,108	-	yjgM	b4256	0.10	+0.3
4,477,119	+	yjgM	b4256	0.12	-0.2
4,477,119	+	yjgM	b4256	0.12	-0.0
4,477,130	+	yjgM	b4256	0.14	-0.3
4,477,130	+	yjgM	b4256	0.14	+0.0
4,477,184	+	yjgM	b4256	0.25	+0.1
4,477,192	+	yjgM	b4256	0.27	+0.4
4,477,202	+	yjgM	b4256	0.29	-0.9
4,477,202	-	yjgM	b4256	0.29	+0.2
4,477,213	+	yjgM	b4256	0.31	+1.8
4,477,213	-	yjgM	b4256	0.31	+0.0
4,477,219	+	yjgM	b4256	0.32	+0.8
4,477,310	-	yjgM	b4256	0.50	-0.5
4,477,319	+	yjgM	b4256	0.52	-0.9
4,477,331	+	yjgM	b4256	0.54	+0.3