Strain Fitness in Escherichia coli BW25113 around b4117

Experiment: Ying_AminoAcid20 rep A; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep A; time point 3
4,335,278	-	adiY	b4116	0.11	-0.5
4,335,278	-	adiY	b4116	0.11	+0.7
4,335,279	+	adiY	b4116	0.12	-0.3
4,335,279	+	adiY	b4116	0.12	-0.8
4,335,279	+	adiY	b4116	0.12	+0.5
4,335,280	-	adiY	b4116	0.12	-0.6
4,335,280	-	adiY	b4116	0.12	+0.1
4,335,282	+	adiY	b4116	0.12	-0.0
4,335,282	+	adiY	b4116	0.12	+1.0
4,335,282	+	adiY	b4116	0.12	+1.3
4,335,284	+	adiY	b4116	0.12	-0.2
4,335,284	+	adiY	b4116	0.12	-0.5
4,335,284	+	adiY	b4116	0.12	-0.7
4,335,284	+	adiY	b4116	0.12	+0.1
4,335,284	+	adiY	b4116	0.12	+1.3
4,335,284	+	adiY	b4116	0.12	+0.6
4,335,284	+	adiY	b4116	0.12	-0.2
4,335,284	+	adiY	b4116	0.12	-1.1
4,335,284	+	adiY	b4116	0.12	-0.6
4,335,284	+	adiY	b4116	0.12	-2.5
4,335,284	+	adiY	b4116	0.12	-0.4
4,335,284	+	adiY	b4116	0.12	-0.3
4,335,287	-	adiY	b4116	0.13	+0.3
4,335,289	-	adiY	b4116	0.13	-1.2
4,335,289	-	adiY	b4116	0.13	+0.1
4,335,290	-	adiY	b4116	0.13	+0.5
4,335,290	-	adiY	b4116	0.13	+0.2
4,335,290	-	adiY	b4116	0.13	-0.4
4,335,290	-	adiY	b4116	0.13	-0.3
4,335,291	+	adiY	b4116	0.13	+0.1
4,335,292	-	adiY	b4116	0.13	-0.2
4,335,292	-	adiY	b4116	0.13	-0.1
4,335,292	-	adiY	b4116	0.13	-0.5
4,335,292	-	adiY	b4116	0.13	-0.0
4,335,292	-	adiY	b4116	0.13	-0.8
4,335,292	-	adiY	b4116	0.13	-2.9
4,335,292	-	adiY	b4116	0.13	+0.1
4,335,292	-	adiY	b4116	0.13	+0.1
4,335,292	-	adiY	b4116	0.13	+0.7
4,335,292	-	adiY	b4116	0.13	+0.7
4,335,292	-	adiY	b4116	0.13	-0.9
4,335,292	-	adiY	b4116	0.13	+2.0
4,335,292	-	adiY	b4116	0.13	-0.1
4,335,296	+	adiY	b4116	0.14	+0.1
4,335,299	+	adiY	b4116	0.14	+0.1
4,335,330	+	adiY	b4116	0.18	+0.6
4,335,331	+	adiY	b4116	0.18	-1.7
4,335,348	+	adiY	b4116	0.21	-1.0
4,335,348	+	adiY	b4116	0.21	-0.7
4,335,356	-	adiY	b4116	0.22	+0.1
4,335,373	+	adiY	b4116	0.24	-0.0
4,335,379	+	adiY	b4116	0.25	+1.1
4,335,387	-	adiY	b4116	0.26	-2.0
4,335,400	-	adiY	b4116	0.27	+0.2
4,335,400	-	adiY	b4116	0.27	-1.7
4,335,407	-	adiY	b4116	0.28	+0.4
4,335,419	-	adiY	b4116	0.30	+1.1
4,335,419	-	adiY	b4116	0.30	+0.1
4,335,419	-	adiY	b4116	0.30	-0.6
4,335,426	+	adiY	b4116	0.31	-0.6
4,335,427	+	adiY	b4116	0.31	+0.6
4,335,427	+	adiY	b4116	0.31	-0.7
4,335,429	-	adiY	b4116	0.31	+0.1
4,335,433	+	adiY	b4116	0.32	+0.1
4,335,433	+	adiY	b4116	0.32	+0.7
4,335,433	+	adiY	b4116	0.32	-0.2
4,335,433	+	adiY	b4116	0.32	-1.9
4,335,433	+	adiY	b4116	0.32	+3.1
4,335,433	+	adiY	b4116	0.32	-0.4
4,335,433	+	adiY	b4116	0.32	+0.6
4,335,433	+	adiY	b4116	0.32	-1.7
4,335,433	+	adiY	b4116	0.32	+2.6
4,335,433	+	adiY	b4116	0.32	+0.6
4,335,433	+	adiY	b4116	0.32	+1.6
4,335,440	-	adiY	b4116	0.33	+0.0
4,335,440	-	adiY	b4116	0.33	+0.6
4,335,441	-	adiY	b4116	0.33	+0.1
4,335,441	-	adiY	b4116	0.33	-0.6
4,335,441	-	adiY	b4116	0.33	+1.8
4,335,441	-	adiY	b4116	0.33	+0.3
4,335,451	-	adiY	b4116	0.34	+0.1
4,335,461	+	adiY	b4116	0.35	+0.2
4,335,469	-	adiY	b4116	0.36	+2.6
4,335,470	+	adiY	b4116	0.37	+0.6
4,335,519	-	adiY	b4116	0.43	+2.0
4,335,519	-	adiY	b4116	0.43	+1.6
4,335,519	-	adiY	b4116	0.43	+2.6
4,335,521	+	adiY	b4116	0.43	+0.7
4,335,529	+	adiY	b4116	0.44	+0.7
4,335,572	+	adiY	b4116	0.50	-0.4
4,335,572	+	adiY	b4116	0.50	-0.4
4,335,572	+	adiY	b4116	0.50	-2.2
4,335,572	+	adiY	b4116	0.50	-0.4
4,335,578	-	adiY	b4116	0.51	-0.9
4,335,578	-	adiY	b4116	0.51	-0.7
4,335,580	-	adiY	b4116	0.51	+0.5
4,335,582	+	adiY	b4116	0.51	+1.6
4,335,582	+	adiY	b4116	0.51	+2.0
4,335,584	+	adiY	b4116	0.52	+1.6
4,335,587	+	adiY	b4116	0.52	+2.6
4,335,587	+	adiY	b4116	0.52	+2.6
4,335,592	-	adiY	b4116	0.53	+0.8
4,335,605	+	adiY	b4116	0.54	+2.6
4,335,625	+	adiY	b4116	0.57	+3.6
4,335,631	+	adiY	b4116	0.58	+0.8
4,335,631	+	adiY	b4116	0.58	-1.0
4,335,632	+	adiY	b4116	0.58	+0.6
4,335,636	+	adiY	b4116	0.58	+1.8
4,335,636	+	adiY	b4116	0.58	+0.4
4,335,636	+	adiY	b4116	0.58	-0.2
4,335,636	+	adiY	b4116	0.58	+1.3
4,335,636	+	adiY	b4116	0.58	+1.6
4,335,639	-	adiY	b4116	0.59	+0.1
4,335,641	+	adiY	b4116	0.59	+0.4
4,335,644	-	adiY	b4116	0.59	+0.2
4,335,644	-	adiY	b4116	0.59	+0.5
4,335,649	+	adiY	b4116	0.60	+1.6
4,335,649	-	adiY	b4116	0.60	+0.3
4,335,649	-	adiY	b4116	0.60	-1.4
4,335,651	-	adiY	b4116	0.60	-0.7
4,335,675	+	adiY	b4116	0.64	+1.1
4,335,678	-	adiY	b4116	0.64	+0.4
4,335,684	-	adiY	b4116	0.65	-0.0
4,335,685	+	adiY	b4116	0.65	+0.0
4,335,685	+	adiY	b4116	0.65	-1.0
4,335,686	+	adiY	b4116	0.65	-0.9
4,335,686	+	adiY	b4116	0.65	+0.6
4,335,687	+	adiY	b4116	0.65	+0.0
4,335,689	+	adiY	b4116	0.65	-0.3
4,335,689	+	adiY	b4116	0.65	+0.1
4,335,689	+	adiY	b4116	0.65	-0.6
4,335,689	+	adiY	b4116	0.65	-0.4
4,335,690	+	adiY	b4116	0.65	-1.4
4,335,690	+	adiY	b4116	0.65	-0.3
4,335,691	+	adiY	b4116	0.66	+0.5
4,335,697	-	adiY	b4116	0.66	+1.0
4,335,697	-	adiY	b4116	0.66	+2.6
4,335,697	-	adiY	b4116	0.66	-1.7
4,335,702	+	adiY	b4116	0.67	+0.7
4,335,702	+	adiY	b4116	0.67	+0.5
4,335,702	+	adiY	b4116	0.67	+0.6
4,335,702	+	adiY	b4116	0.67	+0.4
4,335,702	+	adiY	b4116	0.67	-0.3
4,335,703	-	adiY	b4116	0.67	+2.6
4,335,704	-	adiY	b4116	0.67	+2.6
4,335,709	-	adiY	b4116	0.68	+2.6
4,335,710	+	adiY	b4116	0.68	-1.4
4,335,710	-	adiY	b4116	0.68	+2.6
4,335,710	-	adiY	b4116	0.68	+2.6
4,335,712	+	adiY	b4116	0.68	-0.1
4,335,712	+	adiY	b4116	0.68	+0.4
4,335,743	-	adiY	b4116	0.72	+2.6
4,335,769	+	adiY	b4116	0.76	+0.5
4,335,770	+	adiY	b4116	0.76	+0.1
4,335,770	+	adiY	b4116	0.76	+1.3
4,335,770	+	adiY	b4116	0.76	+0.3
4,335,778	-	adiY	b4116	0.77	+2.6
4,335,779	+	adiY	b4116	0.77	+1.0
4,335,779	+	adiY	b4116	0.77	+1.3
4,335,797	+	adiY	b4116	0.80	+0.2
4,335,847	+	adiY	b4116	0.86	+1.6
4,335,847	+	adiY	b4116	0.86	+0.9
4,335,847	+	adiY	b4116	0.86	+2.6
4,335,858	+	adiY	b4116	0.88	-1.0
4,335,858	+	adiY	b4116	0.88	+0.0
4,335,859	+	adiY	b4116	0.88	-0.2
4,335,859	+	adiY	b4116	0.88	+0.7
4,335,859	-	adiY	b4116	0.88	+1.0
4,335,859	-	adiY	b4116	0.88	+2.6
4,335,866	-	adiY	b4116	0.89	-0.4
4,335,866	-	adiY	b4116	0.89	+1.6
4,335,867	-	adiY	b4116	0.89	+2.6
4,335,875	-	adiY	b4116	0.90	+1.6
4,335,883	+				-1.2
4,335,884	+				-1.7
4,335,894	+				-0.2
4,335,897	-				+1.0
4,335,897	-				+3.9
4,335,924	+				-0.8
4,335,924	+				+2.0
4,335,924	+				+2.6
4,335,929	+				+1.0
4,335,929	+				-0.7
4,335,932	-				-0.5
4,335,932	-				+0.6
4,335,932	-				+0.9
4,335,932	-				+0.3
4,335,939	+				-0.2
4,335,946	+				-1.2
4,335,948	+				+0.3
4,335,948	+				+0.7
4,335,948	+				-0.3
4,335,949	+				+0.3
4,335,952	+				+0.6
4,335,954	-				-0.1
4,335,954	-				+0.6
4,335,954	-				-0.1
4,335,955	-				-0.3
4,335,956	-				+0.7
4,335,960	-				+0.1
4,335,960	-				-0.4
4,335,967	-				-0.1
4,335,968	-				-0.2
4,335,970	-				+0.8
4,335,984	+				-1.3
4,335,984	+				+0.1
4,335,984	+				-0.7
4,335,984	+				-0.2
4,335,984	+				+0.4
4,335,984	+				+0.7
4,335,984	+				+0.9
4,335,984	+				-1.0
4,335,984	+				+0.6
4,335,984	+				+0.4
4,335,992	-				+1.0
4,335,992	-				-1.3
4,335,997	-				-0.4
4,335,997	-				+0.0
4,336,060	+				-2.4
4,336,070	-				+0.1
4,336,070	-				+0.0
4,336,070	-				-0.2
4,336,070	-				-2.5
4,336,080	-				-2.5
4,336,080	-				+1.1
4,336,146	+				+2.6
4,336,146	+				+1.6
4,336,146	+				-0.2
4,336,146	+				+0.1
4,336,146	+				+0.1
4,336,146	+				-1.4
4,336,146	+				+0.3
4,336,146	+				-0.0
4,336,146	+				-0.7
4,336,154	-				+0.2
4,336,154	-				+1.1
4,336,154	-				-0.8
4,336,154	-				-0.6
4,336,154	-				+1.3
4,336,165	+				-0.7
4,336,165	+				+2.6
4,336,165	-				-0.3
4,336,210	+				-0.4
4,336,218	+				+0.4
4,336,218	+				+2.2
4,336,218	+				-1.6
4,336,218	-				+0.5
4,336,218	-				-0.7
4,336,219	+				+0.5
4,336,219	+				-0.3
4,336,227	-				+0.1
4,336,227	-				-0.2
4,336,227	-				+0.6
4,336,227	-				+0.4
4,336,227	-				-0.3
4,336,227	-				+0.1
4,336,227	-				+0.3
4,336,227	-				-0.3
4,336,233	-				+0.5
4,336,238	-				-0.1
4,336,242	-				+0.6
4,336,263	+				+1.0
4,336,265	+				+0.8
4,336,273	+				-0.2
4,336,276	-				+0.7
4,336,281	+				+1.8
4,336,282	-				+0.3
4,336,284	+				+0.7
4,336,290	-				-0.8
4,336,290	-				-0.0
4,336,290	-				+0.6
4,336,292	+				+0.1
4,336,292	-				-0.4
4,336,292	-				-0.6
4,336,294	+				+0.7
4,336,296	+				+0.2
4,336,298	+				-0.5
4,336,298	+				-0.2
4,336,298	-				-0.0
4,336,300	+				+0.4
4,336,306	-				+0.1
4,336,306	-				+0.1
4,336,308	-				+0.2
4,336,308	-				+0.3
4,336,335	-				-0.1
4,336,335	-				-0.3
4,336,342	-				+0.5
4,336,344	+				-1.5
4,336,344	+				-0.2
4,336,344	+				-0.5
4,336,344	+				-0.8
4,336,348	-				+0.2
4,336,352	-				-0.1
4,336,362	+				-0.2
4,336,363	+				+0.5
4,336,365	+				-0.2
4,336,367	+				-0.4
4,336,367	+				+0.8
4,336,368	-				-0.3
4,336,370	-				-0.1
4,336,370	-				+0.3
4,336,370	-				+0.1
4,336,370	-				+0.3
4,336,373	-				+0.4
4,336,375	-				+0.1
4,336,375	-				-0.4
4,336,375	-				+0.3
4,336,390	-				-0.4
4,336,436	-				-0.6
4,336,467	-				-0.2
4,336,589	+	adiA	b4117	0.14	-0.2
4,336,693	+	adiA	b4117	0.18	-0.0
4,336,755	-	adiA	b4117	0.21	+0.5
4,336,763	-	adiA	b4117	0.21	-0.3
4,336,784	+	adiA	b4117	0.22	+0.1
4,336,832	+	adiA	b4117	0.24	-1.1
4,336,837	+	adiA	b4117	0.25	+0.1
4,336,840	-	adiA	b4117	0.25	+1.3
4,336,840	-	adiA	b4117	0.25	+1.1
4,336,866	-	adiA	b4117	0.26	-0.6
4,336,914	+	adiA	b4117	0.28	+0.0
4,336,956	+	adiA	b4117	0.30	-0.0
4,336,990	+	adiA	b4117	0.31	+0.5
4,337,006	+	adiA	b4117	0.32	+0.1
4,337,008	+	adiA	b4117	0.32	-0.2
4,337,021	+	adiA	b4117	0.33	+0.1
4,337,041	+	adiA	b4117	0.34	-0.0
4,337,041	+	adiA	b4117	0.34	-0.1
4,337,108	-	adiA	b4117	0.37	-0.2
4,337,184	-	adiA	b4117	0.40	-0.7
4,337,240	-	adiA	b4117	0.42	+0.1
4,337,240	-	adiA	b4117	0.42	-0.2
4,337,298	+	adiA	b4117	0.45	-1.0
4,337,298	+	adiA	b4117	0.45	+0.6
4,337,311	-	adiA	b4117	0.46	+0.3
4,337,311	-	adiA	b4117	0.46	+0.3
4,337,340	-	adiA	b4117	0.47	-0.1
4,337,413	+	adiA	b4117	0.50	+0.0
4,337,452	-	adiA	b4117	0.52	+0.4
4,337,457	-	adiA	b4117	0.52	-0.6
4,337,471	-	adiA	b4117	0.53	-0.5
4,337,489	+	adiA	b4117	0.53	-0.3
4,337,489	+	adiA	b4117	0.53	-0.0
4,337,510	-	adiA	b4117	0.54	+0.1
4,337,543	-	adiA	b4117	0.56	-0.4
4,337,559	+	adiA	b4117	0.57	+0.1
4,337,567	-	adiA	b4117	0.57	-0.1
4,337,593	+	adiA	b4117	0.58	-0.2
4,337,764	-	adiA	b4117	0.66	+0.2
4,337,786	+	adiA	b4117	0.67	-0.5
4,337,786	+	adiA	b4117	0.67	-1.0
4,337,879	-	adiA	b4117	0.71	-0.1
4,338,111	+	adiA	b4117	0.81	+0.2
4,338,119	-	adiA	b4117	0.81	+0.5
4,338,208	-	adiA	b4117	0.85	+0.3
4,338,224	+	adiA	b4117	0.86	+0.2
4,338,224	+	adiA	b4117	0.86	-0.2
4,338,318	-				+0.8
4,338,318	-				-0.5
4,338,350	-				-0.1
4,338,352	-				+0.3
4,338,352	-				+0.4
4,338,401	-				-0.3
4,338,442	+				+0.0
4,338,465	-				+0.7
4,338,465	-				+0.4
4,338,484	-				+0.2
4,338,503	-				-0.5
4,338,511	-				-0.2
4,338,511	-				+0.1
4,338,723	+				-0.1
4,338,901	-	melR	b4118	0.17	-0.8
4,339,019	+	melR	b4118	0.30	+0.8
4,339,030	+	melR	b4118	0.32	+0.0
4,339,030	+	melR	b4118	0.32	+0.4
4,339,346	-	melR	b4118	0.66	-0.2
4,339,376	+	melR	b4118	0.70	-0.3
4,339,376	+	melR	b4118	0.70	+0.5
4,339,421	-	melR	b4118	0.75	+0.4
4,339,427	-	melR	b4118	0.75	-0.0
4,339,434	+	melR	b4118	0.76	-0.9
4,339,501	+	melR	b4118	0.83	-0.1