Strain Fitness in Escherichia coli BW25113 around b2780
Experiment: Ying_AminoAcid20 rep A; time point 3
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Ying_AminoAcid20 rep A; time point 3 |
---|---|---|---|---|---|
remove | |||||
2,907,991 | - | +0.1 | |||
2,908,016 | - | mazG | b2781 | 0.13 | -0.2 |
2,908,022 | - | mazG | b2781 | 0.13 | -0.7 |
2,908,082 | + | mazG | b2781 | 0.21 | +0.7 |
2,908,122 | - | mazG | b2781 | 0.26 | +0.1 |
2,908,157 | - | mazG | b2781 | 0.30 | +0.3 |
2,908,172 | + | mazG | b2781 | 0.32 | +0.7 |
2,908,172 | + | mazG | b2781 | 0.32 | +1.0 |
2,908,377 | - | mazG | b2781 | 0.58 | +0.1 |
2,908,538 | + | mazG | b2781 | 0.79 | -0.5 |
2,908,571 | + | mazG | b2781 | 0.83 | -0.3 |
2,908,624 | + | mazG | b2781 | 0.89 | -0.8 |
2,908,674 | + | +0.3 | |||
2,908,674 | + | -0.0 | |||
2,908,674 | + | -0.1 | |||
2,908,674 | + | +0.0 | |||
2,908,682 | - | -0.5 |
Or see this region's nucleotide sequence