Strain Fitness in Escherichia coli BW25113 around b2722

Experiment: Ying_AminoAcid20 rep A; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep A; time point 3
2,843,564	+	hycE	b2721	0.46	+0.6
2,843,572	-	hycE	b2721	0.46	+0.4
2,843,600	+	hycE	b2721	0.48	+0.2
2,843,600	+	hycE	b2721	0.48	-0.1
2,843,626	+	hycE	b2721	0.49	+0.3
2,843,631	+	hycE	b2721	0.50	+0.1
2,843,663	+	hycE	b2721	0.51	-0.1
2,843,674	-	hycE	b2721	0.52	+0.2
2,843,704	+	hycE	b2721	0.54	-0.4
2,843,704	+	hycE	b2721	0.54	-0.3
2,843,731	-	hycE	b2721	0.55	+0.1
2,843,753	-	hycE	b2721	0.57	+0.2
2,843,753	-	hycE	b2721	0.57	+0.4
2,843,765	+	hycE	b2721	0.57	-0.1
2,843,952	+	hycE	b2721	0.68	+0.1
2,844,142	+	hycE	b2721	0.79	+0.6
2,844,231	+	hycE	b2721	0.85	+0.1
2,844,284	-	hycE	b2721	0.88	+0.8
2,844,422	+				+0.6
2,844,422	+				-0.6
2,844,443	-				+0.2
2,844,462	+				+0.5
2,844,470	-				-0.6
2,844,470	-				-1.2
2,844,569	-				+0.6
2,844,576	+				-0.8
2,844,607	-	hycD	b2722	0.10	+0.0
2,844,761	-	hycD	b2722	0.27	+0.2
2,844,789	-	hycD	b2722	0.30	-0.1
2,844,937	+	hycD	b2722	0.46	-0.0
2,844,945	-	hycD	b2722	0.47	+0.2
2,844,945	-	hycD	b2722	0.47	-1.9
2,844,984	+	hycD	b2722	0.51	+0.0
2,845,140	-	hycD	b2722	0.68	+0.2
2,845,212	-	hycD	b2722	0.76	+0.3
2,845,231	-	hycD	b2722	0.78	-0.5
2,845,269	-	hycD	b2722	0.82	+1.0
2,845,320	+	hycD	b2722	0.88	-0.1
2,845,428	-				-0.2
2,845,428	-				+0.3
2,845,487	+				+0.3
2,845,594	+				-0.7
2,845,594	+				-0.4
2,846,220	+	hycC	b2723	0.43	+1.1
2,846,226	+	hycC	b2723	0.43	-0.5
2,846,264	+	hycC	b2723	0.45	-0.5
2,846,269	+	hycC	b2723	0.46	+0.7
2,846,269	+	hycC	b2723	0.46	-0.6
2,846,269	+	hycC	b2723	0.46	+1.3
2,846,269	+	hycC	b2723	0.46	+0.8
2,846,272	-	hycC	b2723	0.46	-0.9
2,846,345	-	hycC	b2723	0.50	+0.0
2,846,381	+	hycC	b2723	0.52	-0.3
2,846,406	-	hycC	b2723	0.53	-0.7
2,846,406	-	hycC	b2723	0.53	-1.1