Strain Fitness in Escherichia coli BW25113 around b2468

Experiment: Ying_AminoAcid20 rep A; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep A; time point 3
2,580,572	+	ypfG	b2466	0.78	-0.2
2,580,609	+	ypfG	b2466	0.82	+0.3
2,580,609	+	ypfG	b2466	0.82	-0.8
2,580,959	+				+2.0
2,580,959	+				+0.3
2,581,059	-	yffH	b2467	0.23	+0.3
2,581,099	-	yffH	b2467	0.30	+0.3
2,581,124	+	yffH	b2467	0.35	+0.3
2,581,325	+	yffH	b2467	0.69	+0.2
2,581,335	-	yffH	b2467	0.71	+0.5
2,581,342	+	yffH	b2467	0.72	-0.3
2,581,350	-	yffH	b2467	0.74	-0.1
2,581,369	-				-0.3
2,581,372	+	yffH	b2467	0.78	-0.5
2,581,380	-	yffH	b2467	0.79	-0.2
2,581,380	-	yffH	b2467	0.79	+0.4
2,581,445	+				+0.1
2,581,453	-				-1.0
2,581,453	-				-0.2
2,581,570	+				-0.2
2,581,570	+				+0.2
2,581,662	-				+0.4
2,581,712	-				+0.1
2,581,718	-				+0.5
2,581,718	-				-0.1
2,581,759	+				+0.1
2,582,128	+	aegA	b2468	0.28	-0.0
2,582,194	+	aegA	b2468	0.32	+0.1
2,582,250	+	aegA	b2468	0.34	+0.4
2,582,417	-	aegA	b2468	0.43	-0.5
2,582,417	-	aegA	b2468	0.43	+0.3
2,582,423	-	aegA	b2468	0.43	+0.5
2,582,423	-	aegA	b2468	0.43	+0.5
2,582,533	-	aegA	b2468	0.49	+0.3
2,582,533	-	aegA	b2468	0.49	+0.5
2,582,668	-	aegA	b2468	0.56	-0.2
2,582,757	-	aegA	b2468	0.60	-0.0
2,582,809	+	aegA	b2468	0.63	-0.7
2,582,809	+	aegA	b2468	0.63	-0.1
2,582,817	-	aegA	b2468	0.63	+0.1
2,582,824	-	aegA	b2468	0.63	+0.4
2,582,824	-	aegA	b2468	0.63	-0.6
2,582,827	+	aegA	b2468	0.64	+0.3
2,582,883	+	aegA	b2468	0.66	-1.0
2,582,883	+	aegA	b2468	0.66	+0.3
2,582,970	+	aegA	b2468	0.71	-0.9
2,583,092	+	aegA	b2468	0.77	-0.2
2,583,099	-	aegA	b2468	0.77	+0.0
2,583,118	+	aegA	b2468	0.78	-0.3
2,583,374	+				-0.4
2,583,400	+				-1.3
2,583,451	+				-0.9
2,583,510	+				-0.1
2,583,609	-				-0.6
2,583,673	-				-0.5
2,583,698	-				+0.3
2,583,779	-				+0.0
2,583,788	-				+0.1
2,583,788	-				+0.1
2,583,986	+	narQ	b2469	0.14	+0.2
2,583,996	+	narQ	b2469	0.14	+1.5
2,584,021	-	narQ	b2469	0.16	-0.2
2,584,107	+	narQ	b2469	0.21	+0.4
2,584,107	+	narQ	b2469	0.21	-0.1
2,584,112	+	narQ	b2469	0.21	-0.0
2,584,137	-	narQ	b2469	0.23	-0.3
2,584,152	-	narQ	b2469	0.23	-1.8
2,584,167	+	narQ	b2469	0.24	-1.5
2,584,172	+	narQ	b2469	0.25	-1.4
2,584,172	+	narQ	b2469	0.25	+0.2
2,584,314	-	narQ	b2469	0.33	+0.4
2,584,409	-	narQ	b2469	0.39	+0.2
2,584,422	+	narQ	b2469	0.39	+0.1
2,584,422	+	narQ	b2469	0.39	+0.1
2,584,523	+	narQ	b2469	0.45	+0.3
2,584,541	+	narQ	b2469	0.46	+0.2