Strain Fitness in Escherichia coli BW25113 around b2310

Experiment: Ying_AminoAcid20 rep A; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep A; time point 3
2,424,158	-	hisJ	b2309	0.17	+0.2
2,424,158	-	hisJ	b2309	0.17	+0.1
2,424,158	-	hisJ	b2309	0.17	-0.1
2,424,239	-	hisJ	b2309	0.27	+0.1
2,424,383	+	hisJ	b2309	0.45	+0.8
2,424,384	-	hisJ	b2309	0.45	+0.4
2,424,406	-	hisJ	b2309	0.48	+0.0
2,424,863	-				-0.3
2,425,153	+	argT	b2310	0.16	+0.8
2,425,153	+	argT	b2310	0.16	+0.2
2,425,161	-	argT	b2310	0.17	-0.8
2,425,161	-	argT	b2310	0.17	-0.9
2,425,253	+	argT	b2310	0.28	+0.5
2,425,280	+	argT	b2310	0.32	+0.4
2,425,286	-	argT	b2310	0.33	+0.1
2,425,319	-	argT	b2310	0.37	+0.1
2,425,339	-	argT	b2310	0.39	+0.7
2,425,353	-	argT	b2310	0.41	+0.1
2,425,353	-	argT	b2310	0.41	-0.5
2,425,387	-	argT	b2310	0.45	+0.7
2,425,387	-	argT	b2310	0.45	-1.0
2,425,402	-	argT	b2310	0.47	-0.6
2,425,543	+	argT	b2310	0.65	-0.1
2,425,702	+	argT	b2310	0.86	-0.3
2,425,705	-	argT	b2310	0.86	-0.7
2,425,732	-	argT	b2310	0.90	-0.2
2,425,742	-				-0.5
2,425,984	-				+0.1
2,426,073	-				+0.2
2,426,795	+				-5.4
2,426,795	+				-4.3