Strain Fitness in Escherichia coli BW25113 around b2210

Experiment: Ying_AminoAcid20 rep A; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep A; time point 3
2,302,294	+	eco	b2209	0.75	-0.1
2,302,310	-	eco	b2209	0.78	-0.3
2,302,522	+				+0.3
2,302,748	+				-0.3
2,302,763	+				+0.8
2,302,763	+				+0.3
2,302,773	+				-0.2
2,303,223	-				+0.2
2,303,225	+				+0.4
2,303,226	+				+0.4
2,303,244	+				+0.6
2,303,346	-	mqo	b2210	0.13	+0.6
2,303,346	-	mqo	b2210	0.13	+0.2
2,303,421	-	mqo	b2210	0.18	-0.6
2,303,421	-	mqo	b2210	0.18	-0.1
2,303,579	-	mqo	b2210	0.27	+0.8
2,303,672	+	mqo	b2210	0.33	-0.3
2,303,680	-	mqo	b2210	0.33	+0.2
2,303,694	+	mqo	b2210	0.34	+0.1
2,303,694	+	mqo	b2210	0.34	+0.9
2,303,702	-	mqo	b2210	0.35	-0.3
2,303,702	-	mqo	b2210	0.35	-0.9
2,303,702	-	mqo	b2210	0.35	-0.0
2,303,767	+	mqo	b2210	0.39	-0.3
2,303,843	-	mqo	b2210	0.43	+0.9
2,303,919	+				+2.2
2,303,955	+	mqo	b2210	0.50	-0.9
2,304,051	-	mqo	b2210	0.56	+0.2
2,304,051	-	mqo	b2210	0.56	+0.3
2,304,174	-	mqo	b2210	0.63	-0.8
2,304,174	-	mqo	b2210	0.63	-0.1
2,304,237	+				+0.1
2,304,388	+	mqo	b2210	0.76	+0.7
2,304,409	+	mqo	b2210	0.78	+0.3
2,304,417	-	mqo	b2210	0.78	-0.7
2,304,444	-	mqo	b2210	0.80	-0.4
2,304,524	+	mqo	b2210	0.85	-0.4
2,304,577	+	mqo	b2210	0.88	+0.0
2,304,578	+	mqo	b2210	0.88	+1.3
2,304,578	+	mqo	b2210	0.88	+0.6
2,304,991	+				-0.2
2,305,038	+				-0.6
2,305,038	+				+1.2
2,305,045	+				+0.2
2,305,067	-				+0.0
2,305,102	+				+0.0
2,305,120	-				+0.5
2,305,289	+	yojI	b2211	0.18	+0.7
2,305,302	+	yojI	b2211	0.19	-0.5
2,305,390	-	yojI	b2211	0.24	-0.7
2,305,439	-	yojI	b2211	0.27	+0.7
2,305,529	+	yojI	b2211	0.33	+0.1
2,305,616	-	yojI	b2211	0.38	+0.3
2,305,720	-	yojI	b2211	0.44	+0.2
2,305,720	-	yojI	b2211	0.44	+0.3
2,305,747	+	yojI	b2211	0.46	+0.3
2,305,747	+	yojI	b2211	0.46	-0.5
2,305,760	+	yojI	b2211	0.47	-0.1
2,305,763	+	yojI	b2211	0.47	+0.8