Strain Fitness in Escherichia coli BW25113 around b1628

Experiment: Ying_AminoAcid20 rep A; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep A; time point 3
1,703,377	-	b1626	b1626	0.23	+0.1
1,703,377	-	b1626	b1626	0.23	+0.4
1,703,377	-	b1626	b1626	0.23	-0.2
1,703,380	-	b1626	b1626	0.24	+1.6
1,703,380	-	b1626	b1626	0.24	+2.5
1,703,424	+	b1626	b1626	0.34	-0.5
1,703,427	-	b1626	b1626	0.35	+0.6
1,703,427	-	b1626	b1626	0.35	+0.4
1,703,480	+	b1626	b1626	0.47	-1.0
1,703,495	+	b1626	b1626	0.50	-0.5
1,703,503	-	b1626	b1626	0.52	+0.3
1,703,518	-	b1626	b1626	0.55	-1.0
1,703,518	-	b1626	b1626	0.55	+0.3
1,703,527	+	b1626	b1626	0.57	-1.1
1,703,537	+	b1626	b1626	0.60	+0.4
1,703,542	+	b1626	b1626	0.61	+0.6
1,703,542	+	b1626	b1626	0.61	+0.1
1,703,549	-	b1626	b1626	0.62	-0.8
1,703,609	+	b1626	b1626	0.76	+0.0
1,703,617	-	b1626	b1626	0.78	-0.8
1,703,670	+	b1626	b1626	0.90	-1.1
1,703,671	-				+0.4
1,703,671	-				-0.1
1,703,819	+				+1.2
1,703,827	-				+0.7
1,703,845	-				+1.5
1,703,847	+				+0.4
1,703,861	+	rsxA	b1627	0.12	+0.1
1,703,861	+	rsxA	b1627	0.12	-0.0
1,703,908	-	rsxA	b1627	0.20	+0.8
1,704,048	+	rsxA	b1627	0.44	+0.3
1,704,090	-	rsxA	b1627	0.51	+0.6
1,704,235	-	rsxA	b1627	0.76	+0.9
1,704,376	+				+0.0
1,704,376	+				-0.4
1,704,377	-				-0.4
1,704,525	-	rsxB	b1628	0.26	+1.1
1,704,772	+	rsxB	b1628	0.69	+0.9
1,704,806	+	rsxB	b1628	0.75	+0.8
1,705,039	+				+0.7
1,705,042	-				+0.6
1,705,235	-	rsxC	b1629	0.13	+0.4
1,705,290	+	rsxC	b1629	0.16	+0.5
1,705,290	+	rsxC	b1629	0.16	-1.9
1,705,308	-	rsxC	b1629	0.16	+1.0
1,705,308	-	rsxC	b1629	0.16	+0.2
1,705,459	+	rsxC	b1629	0.23	+1.2
1,705,459	+	rsxC	b1629	0.23	+1.4
1,705,529	-	rsxC	b1629	0.26	+0.8
1,705,579	+	rsxC	b1629	0.29	-1.3
1,705,727	-	rsxC	b1629	0.35	+1.7
1,705,812	+	rsxC	b1629	0.39	+1.1