Strain Fitness in Escherichia coli BW25113 around b1242

Experiment: Ying_AminoAcid20 rep A; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep A; time point 3
1,296,997	-	adhE	b1241	0.87	+0.6
1,297,301	+				+0.5
1,297,311	-				-0.4
1,297,349	-				+0.6
1,297,349	-				+0.3
1,297,391	+				-1.0
1,297,500	+				+0.3
1,297,500	+				-0.4
1,297,531	-				+0.9
1,297,531	-				-0.6
1,297,558	-				+0.5
1,297,750	-				-0.0
1,297,787	-				+0.0
1,297,936	-	ychE	b1242	0.18	-0.2
1,298,207	-	ychE	b1242	0.60	+1.1
1,298,242	-	ychE	b1242	0.65	+0.7
1,298,242	-	ychE	b1242	0.65	+0.9
1,298,286	-	ychE	b1242	0.72	+0.1
1,298,300	+	ychE	b1242	0.74	+0.9
1,298,334	-	ychE	b1242	0.79	+0.6
1,298,383	+	ychE	b1242	0.87	+0.2
1,298,706	-				+0.3
1,298,706	-				+0.2
1,298,778	+				+0.5
1,298,778	+				+0.2
1,298,844	+				+0.0
1,298,852	+				+0.1
1,298,937	-				+0.7
1,299,060	+				+0.9
1,299,129	+				-0.5
1,299,130	-				+0.2
1,299,130	-				+0.4
1,299,134	+				+0.3
1,299,139	-				+1.0
1,299,142	-				-0.0
1,299,172	+				+0.4
1,299,290	+				+0.7