Strain Fitness in Escherichia coli BW25113 around b4640

Experiment: Ying_all64 rep B; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep B; time point 3
2,065,375	+				-0.1
2,065,413	-				+0.1
2,065,421	+				-0.4
2,065,483	-	yoeG	b4640	0.19	+0.7
2,065,512	+	yoeG	b4640	0.24	-0.8
2,065,543	+	yoeG	b4640	0.30	+1.1
2,065,543	+	yoeG	b4640	0.30	+1.1
2,065,551	-	yoeG	b4640	0.31	+0.5
2,065,551	-	yoeG	b4640	0.31	+0.1
2,065,560	+	yoeG	b4640	0.33	+0.1
2,065,601	+	yoeG	b4640	0.41	+0.1
2,065,611	-	yoeG	b4640	0.43	+2.1
2,065,611	-	yoeG	b4640	0.43	+0.5
2,065,612	+	yoeG	b4640	0.43	+0.8
2,065,653	+	yoeG	b4640	0.50	+0.1
2,065,661	-	yoeG	b4640	0.52	+3.1
2,065,664	+	yoeG	b4640	0.53	+1.1
2,065,666	-	yoeG	b4640	0.53	+1.1
2,065,712	-	yoeG	b4640	0.62	+1.1
2,065,782	+	yoeG	b4640	0.75	+2.1
2,065,858	-	yoeG	b4640	0.89	+0.3
2,065,858	-	yoeG	b4640	0.89	+1.1
2,065,858	-	yoeG	b4640	0.89	+1.1
2,065,891	-				+2.1
2,065,920	+				+1.1
2,065,925	-				+2.8
2,065,925	-				+1.1
2,065,979	-				+0.1
2,066,049	-				+0.7
2,066,102	-				-0.6
2,066,119	-				+0.9
2,066,119	-				+0.6
2,066,129	-				+1.3
2,066,129	-				+0.3
2,066,133	-				-0.4
2,066,134	-				+0.5
2,066,134	-				+0.5
2,066,134	-				+1.1
2,066,138	-				-1.5
2,066,196	-				+0.0
2,066,202	-				+1.4
2,066,202	-				+0.3
2,066,204	+				+2.1
2,066,207	-				+0.2
2,066,207	-				-0.7
2,066,210	+				+0.6
2,066,210	+				-2.3
2,066,220	+				+0.1
2,066,229	-				-0.6
2,066,229	-				+0.7
2,066,289	+				+1.1
2,066,295	-				+0.7
2,066,297	-				+0.9
2,066,297	-				-0.8
2,066,301	+	yoeH	b4641	0.10	+2.7
2,066,302	-	yoeH	b4641	0.11	+0.6
2,066,302	-	yoeH	b4641	0.11	+0.5
2,066,303	-	yoeH	b4641	0.11	-0.4
2,066,303	-	yoeH	b4641	0.11	-0.3
2,066,309	-	yoeH	b4641	0.15	-0.1
2,066,309	-	yoeH	b4641	0.15	-1.3
2,066,309	-	yoeH	b4641	0.15	-0.0
2,066,309	-	yoeH	b4641	0.15	-0.7
2,066,341	-	yoeH	b4641	0.35	-0.3
2,066,341	-	yoeH	b4641	0.35	+0.1
2,066,351	-	yoeH	b4641	0.42	-0.7
2,066,379	-	yoeH	b4641	0.59	-0.1
2,066,389	-	yoeH	b4641	0.65	-0.2
2,066,426	-	yoeH	b4641	0.89	+0.7
2,066,434	-				-0.3
2,066,460	-				-0.2
2,066,460	-				-0.1
2,066,464	-				-0.1
2,066,464	-				-0.3
2,066,468	+				+0.5
2,066,468	+				-1.6
2,066,478	+				+3.6
2,066,483	+				+1.1
2,066,506	-				-0.7
2,066,506	-				+0.2
2,066,654	+				+0.7
2,066,654	+				+0.7
2,066,675	-				-0.0
2,066,787	-	yoeA	b4582	0.42	+0.6
2,066,841	-	yoeA	b4582	0.60	+0.2