Strain Fitness in Escherichia coli BW25113 around b4066

Experiment: Ying_all64 rep B; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep B; time point 3
4,278,958	+	yjcE	b4065	0.58	+0.8
4,278,958	+	yjcE	b4065	0.58	+0.7
4,278,981	-	yjcE	b4065	0.59	-0.5
4,279,123	-	yjcE	b4065	0.68	+0.0
4,279,123	-	yjcE	b4065	0.68	+0.4
4,279,139	+	yjcE	b4065	0.69	-0.1
4,279,162	-	yjcE	b4065	0.70	+0.0
4,279,191	-	yjcE	b4065	0.72	-0.1
4,279,210	+	yjcE	b4065	0.73	+0.8
4,279,245	-	yjcE	b4065	0.75	-0.1
4,279,249	+	yjcE	b4065	0.76	-0.3
4,279,249	+	yjcE	b4065	0.76	+0.2
4,279,260	+	yjcE	b4065	0.76	+0.2
4,279,293	-	yjcE	b4065	0.78	+0.0
4,279,308	+	yjcE	b4065	0.79	-0.0
4,279,377	-	yjcE	b4065	0.83	+0.2
4,279,377	-	yjcE	b4065	0.83	+0.9
4,279,498	+				+0.3
4,279,500	+				+0.7
4,279,524	+				+0.3
4,279,566	+				+1.0
4,279,566	+				+0.7
4,279,582	+				-0.2
4,279,609	+				+0.3
4,279,619	+				-0.3
4,279,619	+				-0.6
4,279,626	-				-1.0
4,279,668	+				+0.8
4,279,672	+				-0.2
4,279,680	-				+1.2
4,279,683	+				-1.3
4,279,709	-				+0.3
4,279,709	-				+0.0
4,279,717	-				-1.2
4,279,717	-				+0.6
4,279,718	+				-0.6
4,279,718	+				-0.6
4,279,718	+				+1.1
4,279,718	+				-0.7
4,279,726	-				-1.6
4,279,726	-				+0.9
4,279,728	+				+0.0
4,279,728	+				+0.3
4,279,728	+				+0.6
4,279,736	-				-0.9
4,279,736	-				+0.3
4,279,736	-				-0.1
4,279,741	-				-0.6
4,279,741	-				+1.3
4,279,790	+				+0.2
4,279,799	-				+1.1
4,279,803	+				-0.7
4,279,809	+				+0.2
4,279,811	-				+1.1
4,279,811	-				+0.3
4,279,817	-				+0.0
4,279,826	-				-0.2
4,279,826	-				+0.3
4,279,850	+				+0.5
4,279,859	-				-0.3
4,279,859	-				+0.3
4,279,860	-				+0.4
4,279,861	-				-0.1
4,279,866	-				+0.5
4,279,866	-				-1.6
4,279,866	-				+0.6
4,279,871	+				-0.0
4,279,878	-				+0.3
4,279,881	+				-0.1
4,279,881	+				+1.4
4,279,881	+				+0.3
4,279,884	+				+0.3
4,279,884	+				+1.0
4,279,891	+				-1.1
4,279,891	-				+0.6
4,279,891	-				-1.1
4,279,924	-				+1.4
4,279,924	-				+1.0
4,279,924	-				+0.2
4,279,930	-				-0.6
4,279,931	+				+0.3
4,279,932	-				+0.5
4,279,932	-				+1.7
4,279,939	-	yjcF	b4066	0.10	+2.6
4,279,968	+	yjcF	b4066	0.13	+3.2
4,279,968	+	yjcF	b4066	0.13	+0.3
4,279,979	+	yjcF	b4066	0.13	+2.6
4,280,057	-	yjcF	b4066	0.19	+1.6
4,281,018	+				+1.0
4,281,018	+				+2.6
4,281,024	-				+2.6
4,281,027	+				+1.0
4,281,046	+				+2.6
4,281,138	-				+0.4
4,281,223	+				+1.3
4,281,230	-				+1.5
4,281,230	-				-0.4
4,281,232	-				+0.2
4,281,243	-				+0.1
4,281,252	-				-0.1
4,281,252	-				-0.1
4,281,252	-				-0.9
4,281,255	-				+0.1
4,281,262	+				-0.7
4,281,262	+				+1.6
4,281,262	+				+1.6
4,281,267	-				+0.5
4,281,270	-				-0.2
4,281,281	-				-1.1
4,281,281	-				+0.2
4,281,282	-				+0.2
4,281,296	-				-0.2
4,281,296	-				+0.3
4,281,296	-				+0.0
4,281,296	-				-0.5
4,281,307	-				+0.5
4,281,308	-				-0.3
4,281,308	-				+0.2
4,281,318	-				+0.3
4,281,321	+				-0.5
4,281,334	-				+0.6
4,281,334	-				+0.4
4,281,341	+				-0.2
4,281,349	-				-0.2
4,281,349	-				+0.3
4,281,349	-				+0.7
4,281,349	-				+0.2
4,281,349	-				+0.4
4,281,349	-				-0.1
4,281,412	+				-1.6
4,281,420	-				-0.1
4,281,420	-				+0.1
4,281,503	+	actP	b4067	0.14	+0.2
4,281,503	+	actP	b4067	0.14	-0.5
4,281,506	-	actP	b4067	0.14	-0.0
4,281,573	-	actP	b4067	0.18	-1.3
4,281,573	-	actP	b4067	0.18	-0.7
4,281,578	-	actP	b4067	0.18	+0.0
4,281,756	-	actP	b4067	0.29	-0.2
4,281,927	-	actP	b4067	0.39	-0.5
4,281,934	+	actP	b4067	0.40	+0.4
4,282,003	-	actP	b4067	0.44	-0.6
4,282,033	-	actP	b4067	0.46	+0.7
4,282,072	-	actP	b4067	0.48	+0.1
4,282,094	-	actP	b4067	0.50	-0.1