Strain Fitness in Escherichia coli BW25113 around b1640

Experiment: Ying_all64 rep B; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep B; time point 3
1,716,201	-	ydhA	b1639	0.34	-0.1
1,716,224	+	ydhA	b1639	0.41	+0.6
1,716,226	+	ydhA	b1639	0.41	+0.2
1,716,226	+	ydhA	b1639	0.41	-0.3
1,716,370	-	ydhA	b1639	0.85	+0.4
1,716,375	+	ydhA	b1639	0.86	+0.4
1,716,375	+	ydhA	b1639	0.86	+0.0
1,716,447	+				+0.2
1,716,447	+				-0.3
1,716,447	+				+0.9
1,716,450	-				-0.6
1,716,554	-				-0.4
1,716,810	+	ydhH	b1640	0.26	+0.4
1,716,989	-	ydhH	b1640	0.43	+0.0
1,717,040	+	ydhH	b1640	0.47	+0.5
1,717,040	+	ydhH	b1640	0.47	+0.1
1,717,318	+	ydhH	b1640	0.72	+0.2
1,717,569	+				-0.3
1,717,569	+				-0.4
1,717,612	-				+0.6
1,717,661	+				+0.7
1,717,661	+				-0.6
1,717,696	-				+0.3
1,717,837	+				-0.3
1,717,934	+				-0.2
1,718,034	-	slyB	b1641	0.29	+0.9