Strain Fitness in Escherichia coli BW25113 around b1159

Experiment: Ying_all64 rep B; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep B; time point 3
1,208,575	-	stfE	b1157	0.47	-0.5
1,208,576	-	stfE	b1157	0.47	+0.8
1,208,586	-	stfE	b1157	0.49	+0.1
1,208,604	-	stfE	b1157	0.52	-0.1
1,208,604	-	stfE	b1157	0.52	+1.1
1,208,604	-	stfE	b1157	0.52	-0.4
1,208,606	-	stfE	b1157	0.53	-0.1
1,208,609	-	stfE	b1157	0.53	-0.3
1,208,638	-	stfE	b1157	0.59	-0.3
1,208,642	-	stfE	b1157	0.60	+0.1
1,208,642	-	stfE	b1157	0.60	+0.1
1,208,642	-	stfE	b1157	0.60	+0.6
1,208,648	+	stfE	b1157	0.61	-2.3
1,208,752	+	stfE	b1157	0.82	+0.7
1,208,756	-	stfE	b1157	0.83	+0.1
1,208,791	-	stfE	b1157	0.90	+0.3
1,208,819	+				+0.3
1,208,838	-				-0.3
1,208,899	-				+0.6
1,208,946	+				+0.1
1,208,946	+				+1.1
1,208,964	-	pin	b1158	0.10	+0.4
1,208,964	-	pin	b1158	0.10	+0.4
1,208,968	+	pin	b1158	0.11	+0.1
1,209,015	-	pin	b1158	0.19	-0.4
1,209,110	-	pin	b1158	0.36	+2.1
1,209,296	+	pin	b1158	0.70	-0.6
1,209,296	+	pin	b1158	0.70	-0.3
1,209,306	+	pin	b1158	0.72	+0.8
1,209,306	+				+1.1
1,209,316	+	pin	b1158	0.74	-0.2
1,209,316	+	pin	b1158	0.74	-0.1
1,209,333	+	pin	b1158	0.77	-0.1
1,209,348	+	pin	b1158	0.79	-0.4
1,209,397	+	pin	b1158	0.88	-0.7
1,209,408	+				-0.3
1,209,423	+				-0.1
1,209,612	+				+1.0
1,209,612	+				+0.1
1,209,620	+				+0.6
1,209,635	+				-2.5
1,209,648	+				+0.2
1,209,648	+				-0.5
1,209,663	+	mcrA	b1159	0.11	-1.1
1,209,743	+	mcrA	b1159	0.21	+3.1
1,209,769	+	mcrA	b1159	0.24	+1.4
1,210,309	+	mcrA	b1159	0.89	+2.1
1,210,442	-				+2.0
1,210,631	+				+2.0
1,210,631	+				+0.0
1,210,646	+				-1.2
1,210,646	+				-0.3
1,210,646	+				-0.5
1,210,655	+	icdC	b4519	0.12	-0.5
1,210,664	+	icdC	b4519	0.17	-0.1
1,210,666	+	icdC	b4519	0.18	+0.1
1,210,666	+	icdC	b4519	0.18	+0.1
1,210,684	+	icdC	b4519	0.29	-1.7
1,210,710	+	icdC	b4519	0.45	-0.8
1,210,733	+	icdC	b4519	0.59	-1.0
1,210,745	+	icdC	b4519	0.66	+0.1
1,210,753	+	icdC	b4519	0.71	+0.3
1,210,753	+	icdC	b4519	0.71	-0.7
1,210,753	+	icdC	b4519	0.71	+0.6
1,210,753	+	icdC	b4519	0.71	-1.4
1,210,769	+	icdC	b4519	0.81	+0.0
1,210,794	+				+0.1
1,210,812	+				+1.0
1,210,812	+				-1.0
1,210,982	-	elbA	b1160	0.24	-0.1
1,210,987	-	elbA	b1160	0.26	+2.1