Strain Fitness in Escherichia coli BW25113 around b1127

Experiment: Ying_all64 rep B; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep B; time point 3
1,184,139	-	potA	b1126	0.40	+0.3
1,184,163	+	potA	b1126	0.42	-1.5
1,184,163	+	potA	b1126	0.42	-0.2
1,184,286	+	potA	b1126	0.53	-0.5
1,184,293	+	potA	b1126	0.54	-0.0
1,184,334	-	potA	b1126	0.57	-0.3
1,184,361	-	potA	b1126	0.60	+0.0
1,184,599	-	potA	b1126	0.81	-0.5
1,184,666	+	potA	b1126	0.87	-0.2
1,184,692	+	potA	b1126	0.89	+0.2
1,184,712	+				-0.1
1,184,724	+				-0.4
1,184,732	-				-0.3
1,184,847	+				-0.1
1,185,128	+				+0.8
1,185,135	-				-1.4
1,185,135	-				+0.6
1,185,153	+				-0.3
1,185,190	+	pepT	b1127	0.10	-0.0
1,185,276	+	pepT	b1127	0.17	+0.5
1,185,296	+	pepT	b1127	0.19	+0.4
1,185,409	+	pepT	b1127	0.28	-0.1
1,185,639	+	pepT	b1127	0.47	+0.1
1,185,647	+	pepT	b1127	0.47	+0.5
1,185,720	+	pepT	b1127	0.53	+0.6
1,185,746	-	pepT	b1127	0.55	-0.2
1,185,779	-	pepT	b1127	0.58	-0.4
1,185,886	+	pepT	b1127	0.67	+0.5
1,185,986	-	pepT	b1127	0.75	+0.9
1,186,009	+	pepT	b1127	0.77	+0.5
1,186,182	-				-0.3
1,186,468	-	ycfD	b1128	0.11	+0.1
1,186,507	-	ycfD	b1128	0.15	-0.2
1,186,533	-	ycfD	b1128	0.17	+0.2
1,186,778	+	ycfD	b1128	0.39	-0.4
1,186,778	+	ycfD	b1128	0.39	-0.4
1,186,805	-	ycfD	b1128	0.41	-0.1
1,186,876	-	ycfD	b1128	0.48	+0.6
1,186,942	-	ycfD	b1128	0.53	+0.2
1,186,950	+	ycfD	b1128	0.54	+0.3
1,186,950	+	ycfD	b1128	0.54	-0.1
1,187,202	+	ycfD	b1128	0.77	+0.4
1,187,292	+	ycfD	b1128	0.85	+0.0
1,187,292	+	ycfD	b1128	0.85	-0.8