Strain Fitness in Escherichia coli BW25113 around b1246

Experiment: Ying_all64 rep A; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep A; time point 3
1,301,921	-				-0.3
1,301,964	+	oppC	b1245	0.12	-0.4
1,301,982	+	oppC	b1245	0.14	+0.1
1,302,053	+	oppC	b1245	0.21	+0.1
1,302,057	-	oppC	b1245	0.22	-0.6
1,302,115	+	oppC	b1245	0.28	+0.2
1,302,115	+	oppC	b1245	0.28	-0.1
1,302,159	+	oppC	b1245	0.33	-0.3
1,302,379	-	oppC	b1245	0.57	-1.4
1,302,506	+	oppC	b1245	0.71	-0.1
1,302,506	+	oppC	b1245	0.71	+0.4
1,302,562	+	oppC	b1245	0.77	+0.4
1,302,650	+	oppC	b1245	0.87	+0.0
1,302,650	+	oppC	b1245	0.87	+0.1
1,302,671	+	oppC	b1245	0.89	+0.2
1,302,762	+				-0.1
1,302,762	+				-0.3
1,302,770	+				+0.4
1,302,770	+				+0.4
1,302,770	+				-0.4
1,302,812	+				-0.1
1,302,812	+				-0.0
1,302,860	+				+1.3
1,302,933	+	oppD	b1246	0.15	+0.2
1,303,045	+	oppD	b1246	0.26	+0.5
1,303,071	+	oppD	b1246	0.29	+0.6
1,303,132	+	oppD	b1246	0.35	+0.1
1,303,142	+	oppD	b1246	0.36	+0.1
1,303,155	+	oppD	b1246	0.37	+0.2
1,303,165	+	oppD	b1246	0.38	-0.3
1,303,201	-	oppD	b1246	0.42	+0.4
1,303,342	-	oppD	b1246	0.56	+0.6
1,303,359	+	oppD	b1246	0.57	+0.5
1,303,403	-	oppD	b1246	0.62	+1.5
1,303,405	+	oppD	b1246	0.62	-1.2
1,303,434	-	oppD	b1246	0.65	-0.5
1,303,439	+	oppD	b1246	0.65	+0.0
1,303,439	+	oppD	b1246	0.65	+0.5
1,303,517	+	oppD	b1246	0.73	+0.3
1,303,563	+	oppD	b1246	0.77	+0.7
1,303,571	-	oppD	b1246	0.78	+0.1
1,303,902	+	oppF	b1247	0.11	+0.2
1,303,914	-	oppF	b1247	0.13	-0.5
1,303,981	+	oppF	b1247	0.19	+0.4
1,303,981	+	oppF	b1247	0.19	+0.2
1,304,158	+	oppF	b1247	0.37	+0.3
1,304,294	+	oppF	b1247	0.50	-0.2
1,304,294	+	oppF	b1247	0.50	+0.2
1,304,367	+	oppF	b1247	0.58	-0.6
1,304,720	+				-0.2
1,304,780	-				+1.1
1,304,780	-				+1.1