Strain Fitness in Escherichia coli BW25113 around b3369

Experiment: Ying_all64 rep A; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep A; time point 3
3,496,502	-	cysG	b3368	0.47	-0.1
3,496,504	+	cysG	b3368	0.48	-0.3
3,496,504	+	cysG	b3368	0.48	+0.3
3,496,514	+	cysG	b3368	0.48	+0.5
3,496,514	+	cysG	b3368	0.48	+0.1
3,496,514	+	cysG	b3368	0.48	-0.1
3,496,519	-	cysG	b3368	0.49	+0.3
3,496,529	+	cysG	b3368	0.49	+0.6
3,496,529	+	cysG	b3368	0.49	+0.3
3,496,539	+	cysG	b3368	0.50	+0.2
3,496,539	+	cysG	b3368	0.50	+0.6
3,496,582	-	cysG	b3368	0.53	-0.4
3,496,582	-	cysG	b3368	0.53	+0.1
3,496,582	-	cysG	b3368	0.53	-0.0
3,496,585	+	cysG	b3368	0.53	-0.0
3,496,585	+	cysG	b3368	0.53	+0.2
3,496,585	+	cysG	b3368	0.53	-0.3
3,496,585	-	cysG	b3368	0.53	+0.2
3,496,617	-	cysG	b3368	0.56	+0.7
3,496,622	-	cysG	b3368	0.56	-0.4
3,496,634	+	cysG	b3368	0.57	+0.2
3,496,666	+	cysG	b3368	0.59	-0.1
3,496,666	+	cysG	b3368	0.59	-0.4
3,496,675	+	cysG	b3368	0.60	-0.0
3,496,675	+	cysG	b3368	0.60	-0.1
3,496,679	-	cysG	b3368	0.60	+0.7
3,496,679	-	cysG	b3368	0.60	-0.7
3,496,682	-	cysG	b3368	0.61	+0.1
3,496,697	+	cysG	b3368	0.62	+0.2
3,496,697	+	cysG	b3368	0.62	+0.1
3,496,702	+	cysG	b3368	0.62	-0.2
3,496,702	+	cysG	b3368	0.62	+0.3
3,496,708	-	cysG	b3368	0.62	+0.2
3,496,786	+	cysG	b3368	0.68	+0.6
3,496,794	-	cysG	b3368	0.69	+0.6
3,496,797	+	cysG	b3368	0.69	-0.2
3,496,800	+	cysG	b3368	0.69	-0.4
3,496,800	+	cysG	b3368	0.69	+0.0
3,496,800	+	cysG	b3368	0.69	-0.0
3,496,823	+	cysG	b3368	0.71	+0.7
3,496,823	+	cysG	b3368	0.71	+0.5
3,496,825	+	cysG	b3368	0.71	+0.2
3,496,835	+	cysG	b3368	0.72	-0.1
3,496,841	-	cysG	b3368	0.72	+2.2
3,496,846	+	cysG	b3368	0.72	-0.3
3,496,861	+	cysG	b3368	0.74	-0.1
3,496,861	+	cysG	b3368	0.74	+1.0
3,496,861	+				+1.8
3,496,877	+	cysG	b3368	0.75	+0.8
3,496,877	+	cysG	b3368	0.75	+0.4
3,496,892	+	cysG	b3368	0.76	+0.0
3,496,892	+	cysG	b3368	0.76	-0.2
3,496,904	+	cysG	b3368	0.77	+0.4
3,496,904	+	cysG	b3368	0.77	-0.3
3,496,942	+	cysG	b3368	0.79	-1.3
3,496,942	+	cysG	b3368	0.79	+0.3
3,496,947	+	cysG	b3368	0.80	-1.3
3,496,960	-	cysG	b3368	0.81	+0.0
3,496,981	+	cysG	b3368	0.82	-0.3
3,496,981	+	cysG	b3368	0.82	+0.1
3,496,986	+	cysG	b3368	0.83	+0.6
3,496,986	+	cysG	b3368	0.83	-0.2
3,496,986	+	cysG	b3368	0.83	-0.1
3,496,986	+	cysG	b3368	0.83	-0.2
3,496,988	+	cysG	b3368	0.83	-0.5
3,496,989	+	cysG	b3368	0.83	+0.5
3,496,989	+	cysG	b3368	0.83	-0.9
3,496,989	+	cysG	b3368	0.83	-0.5
3,496,991	+	cysG	b3368	0.83	-0.3
3,496,994	-	cysG	b3368	0.83	+1.3
3,496,994	-	cysG	b3368	0.83	-1.4
3,496,994	-	cysG	b3368	0.83	+1.3
3,496,996	+	cysG	b3368	0.83	+0.5
3,496,996	+	cysG	b3368	0.83	-0.6
3,497,012	+	cysG	b3368	0.85	-0.3
3,497,017	+	cysG	b3368	0.85	+0.1
3,497,054	+	cysG	b3368	0.88	+0.5
3,497,089	+				-0.6
3,497,097	+				+0.4
3,497,097	+				-0.5
3,497,113	+				+0.6
3,497,114	+				+0.5
3,497,114	+				+0.1
3,497,114	+				-0.2
3,497,114	+				-0.1
3,497,114	+				+0.6
3,497,114	+				-0.1
3,497,116	+				-0.1
3,497,117	+				-0.3
3,497,118	+				+0.4
3,497,124	+				-0.3
3,497,124	+				+0.1
3,497,124	+				+0.3
3,497,130	-				+2.3
3,497,136	+				+0.3
3,497,142	+				-0.4
3,497,142	+				-0.1
3,497,143	+				+0.5
3,497,143	+				-0.4
3,497,146	+				+0.5
3,497,159	+				-0.3
3,497,165	+				-0.2
3,497,172	+				+0.5
3,497,173	+				-0.1
3,497,173	+				+0.4
3,497,180	+				+0.0
3,497,180	+				+0.5
3,497,180	+				+0.5
3,497,180	+				+0.2
3,497,190	+				-0.0
3,497,192	+				+0.2
3,497,192	+				+0.3
3,497,192	+				+0.2
3,497,192	+				-2.5
3,497,192	+				+0.5
3,497,192	+				+0.0
3,497,192	+				-1.6
3,497,193	+				-0.0
3,497,205	+				+0.3
3,497,205	+				-0.7
3,497,205	+				+0.1
3,497,213	+				+0.1
3,497,454	-				+0.4
3,497,454	-				+0.5
3,497,494	+	yhfL	b3369	0.14	+1.8
3,497,497	+	yhfL	b3369	0.16	+0.3
3,497,501	+	yhfL	b3369	0.18	+1.0
3,497,501	+	yhfL	b3369	0.18	+0.8
3,497,504	-	yhfL	b3369	0.20	+0.6
3,497,504	-	yhfL	b3369	0.20	+0.2
3,497,506	+	yhfL	b3369	0.21	+0.0
3,497,506	-	yhfL	b3369	0.21	+0.2
3,497,508	+	yhfL	b3369	0.23	+2.3
3,497,508	+	yhfL	b3369	0.23	+1.6
3,497,509	-	yhfL	b3369	0.23	-0.3
3,497,509	-	yhfL	b3369	0.23	-0.2
3,497,509	-	yhfL	b3369	0.23	+0.2
3,497,511	+	yhfL	b3369	0.24	+0.7
3,497,514	-	yhfL	b3369	0.26	+0.3
3,497,514	-	yhfL	b3369	0.26	+1.0
3,497,514	-	yhfL	b3369	0.26	+0.4
3,497,514	-	yhfL	b3369	0.26	+0.0
3,497,514	-	yhfL	b3369	0.26	-0.1
3,497,514	-	yhfL	b3369	0.26	+0.4
3,497,514	-	yhfL	b3369	0.26	-0.8
3,497,514	-	yhfL	b3369	0.26	+0.0
3,497,514	-	yhfL	b3369	0.26	-0.5
3,497,516	+	yhfL	b3369	0.27	+1.0
3,497,516	+	yhfL	b3369	0.27	-1.2
3,497,518	-	yhfL	b3369	0.29	+0.1
3,497,518	-	yhfL	b3369	0.29	+0.3
3,497,518	-	yhfL	b3369	0.29	-0.1
3,497,518	-	yhfL	b3369	0.29	+0.2
3,497,519	-	yhfL	b3369	0.29	+0.0
3,497,519	-	yhfL	b3369	0.29	+0.4
3,497,519	-	yhfL	b3369	0.29	+0.1
3,497,522	+	yhfL	b3369	0.31	-0.4
3,497,522	+	yhfL	b3369	0.31	+0.2
3,497,522	+	yhfL	b3369	0.31	-1.0
3,497,524	-	yhfL	b3369	0.32	+0.5
3,497,524	-	yhfL	b3369	0.32	+0.7
3,497,524	-	yhfL	b3369	0.32	+0.4
3,497,524	-	yhfL	b3369	0.32	+0.8
3,497,524	-	yhfL	b3369	0.32	+0.3
3,497,527	-	yhfL	b3369	0.34	+1.9
3,497,527	-	yhfL	b3369	0.34	+1.0
3,497,531	-	yhfL	b3369	0.36	-0.1
3,497,531	-	yhfL	b3369	0.36	+0.3
3,497,534	-	yhfL	b3369	0.38	-0.4
3,497,534	-	yhfL	b3369	0.38	-0.2
3,497,536	-	yhfL	b3369	0.39	+0.4
3,497,538	-	yhfL	b3369	0.40	+0.3
3,497,547	-	yhfL	b3369	0.46	-0.1
3,497,556	+	yhfL	b3369	0.51	+0.6
3,497,559	-	yhfL	b3369	0.53	-0.0
3,497,562	+	yhfL	b3369	0.55	+1.0
3,497,563	+	yhfL	b3369	0.55	+0.6
3,497,563	+	yhfL	b3369	0.55	+0.4
3,497,563	+	yhfL	b3369	0.55	+0.1
3,497,567	+	yhfL	b3369	0.58	-0.2
3,497,569	-	yhfL	b3369	0.59	+0.5
3,497,571	-	yhfL	b3369	0.60	-1.2
3,497,571	-	yhfL	b3369	0.60	+0.2
3,497,571	-	yhfL	b3369	0.60	+0.5
3,497,572	-	yhfL	b3369	0.61	+1.1
3,497,575	+	yhfL	b3369	0.62	+0.1
3,497,575	+	yhfL	b3369	0.62	+0.1
3,497,580	-	yhfL	b3369	0.65	-0.3
3,497,580	-	yhfL	b3369	0.65	+0.7
3,497,580	-	yhfL	b3369	0.65	+0.2
3,497,583	-	yhfL	b3369	0.67	+0.4
3,497,619	+	yhfL	b3369	0.89	-0.7
3,497,621	+				+0.1
3,497,624	+				-0.4
3,497,627	+				-0.0
3,497,627	-				+0.0
3,497,629	+				+0.1
3,497,629	+				-0.5
3,497,629	-				+0.2
3,497,640	-				-0.2
3,497,711	-				+0.0
3,497,777	-				-0.3
3,497,784	-				+0.2
3,497,784	-				+0.2
3,497,788	+				-0.1
3,497,788	+				+0.3
3,497,801	-				+0.0
3,497,896	+				+0.2
3,497,904	-				+0.3
3,497,907	-				+0.2
3,497,937	-				+0.1
3,497,939	+				+1.0
3,497,939	+				+0.4
3,498,022	-				+0.2
3,498,025	+				+0.4
3,498,025	+				+0.2
3,498,034	-				+0.2
3,498,034	-				-0.5
3,498,048	+				+0.2
3,498,059	+				+0.4
3,498,059	+				+0.3
3,498,059	+				+0.5
3,498,061	-				+0.1
3,498,067	-	yhfM	b3370	0.10	-0.1
3,498,067	-	yhfM	b3370	0.10	-0.8
3,498,077	-	yhfM	b3370	0.11	+1.0
3,498,077	-	yhfM	b3370	0.11	+0.9
3,498,085	+	yhfM	b3370	0.11	+0.3
3,498,089	+	yhfM	b3370	0.12	-0.1
3,498,111	-	yhfM	b3370	0.13	+0.2
3,498,119	+	yhfM	b3370	0.14	+0.2
3,498,129	+	yhfM	b3370	0.15	-0.5
3,498,129	+	yhfM	b3370	0.15	-0.1
3,498,137	-	yhfM	b3370	0.15	+0.8
3,498,137	-	yhfM	b3370	0.15	+0.6
3,498,157	+	yhfM	b3370	0.17	+0.4
3,498,196	+	yhfM	b3370	0.20	+0.6
3,498,196	+	yhfM	b3370	0.20	-0.4
3,498,203	+	yhfM	b3370	0.20	+0.5
3,498,214	+	yhfM	b3370	0.21	-0.0
3,498,248	-	yhfM	b3370	0.24	+0.3
3,498,258	-	yhfM	b3370	0.24	+0.1
3,498,258	-	yhfM	b3370	0.24	+0.3
3,498,261	+	yhfM	b3370	0.25	+0.2
3,498,261	+	yhfM	b3370	0.25	-0.0
3,498,285	+	yhfM	b3370	0.26	+0.1
3,498,349	+	yhfM	b3370	0.31	-0.4
3,498,351	+	yhfM	b3370	0.31	+1.9
3,498,351	+	yhfM	b3370	0.31	-0.5
3,498,365	-	yhfM	b3370	0.32	+0.0
3,498,365	-	yhfM	b3370	0.32	-0.5
3,498,365	-	yhfM	b3370	0.32	+0.0
3,498,375	-	yhfM	b3370	0.33	-0.2
3,498,385	+	yhfM	b3370	0.34	+0.3
3,498,393	-	yhfM	b3370	0.34	+0.4
3,498,446	-	yhfM	b3370	0.38	+0.5
3,498,446	-	yhfM	b3370	0.38	+0.2
3,498,517	-	yhfM	b3370	0.44	+0.5
3,498,535	+	yhfM	b3370	0.45	+0.2
3,498,543	-	yhfM	b3370	0.46	-0.1
3,498,543	-	yhfM	b3370	0.46	-0.6
3,498,549	+	yhfM	b3370	0.46	+0.5
3,498,549	+	yhfM	b3370	0.46	-0.1
3,498,575	+	yhfM	b3370	0.48	-0.1
3,498,620	-	yhfM	b3370	0.51	+0.6
3,498,620	-	yhfM	b3370	0.51	+0.4