Strain Fitness in Escherichia coli BW25113 around b2646

Experiment: Ying_all64 rep A; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep A; time point 3
2,774,493	+	yfjY	b2644	0.18	+0.0
2,774,600	+	yfjY	b2644	0.40	-0.5
2,774,600	+	yfjY	b2644	0.40	-0.3
2,774,651	+	yfjY	b2644	0.50	-0.1
2,774,654	+	yfjY	b2644	0.51	-0.4
2,774,724	-	yfjY	b2644	0.65	+1.0
2,774,726	-	yfjY	b2644	0.66	+0.2
2,774,733	+	yfjY	b2644	0.67	+0.1
2,774,783	+	yfjY	b2644	0.78	-0.2
2,774,796	-	yfjY	b2644	0.80	+0.3
2,774,967	+	ypjJ	b4548	0.34	+0.1
2,775,033	-	ypjJ	b4548	0.67	-0.0
2,775,050	-	ypjJ	b4548	0.75	+0.2
2,775,066	-	ypjJ	b4548	0.83	+0.6
2,775,116	-				+0.7
2,775,157	-				+0.3
2,775,157	-				+0.3
2,775,186	+	yfjZ	b2645	0.15	-0.2
2,775,186	+	yfjZ	b2645	0.15	+0.2
2,775,189	-	yfjZ	b2645	0.16	-0.1
2,775,199	-	yfjZ	b2645	0.19	+0.3
2,775,220	-	yfjZ	b2645	0.26	+0.2
2,775,220	-	yfjZ	b2645	0.26	-0.1
2,775,252	+	yfjZ	b2645	0.36	-0.4
2,775,270	-	yfjZ	b2645	0.42	+0.4
2,775,338	-	yfjZ	b2645	0.63	-0.7
2,775,360	+	yfjZ	b2645	0.70	+0.2
2,775,360	+	yfjZ	b2645	0.70	+0.5
2,775,365	+	yfjZ	b2645	0.72	+0.1
2,775,366	-	yfjZ	b2645	0.72	+0.5
2,775,366	-	yfjZ	b2645	0.72	+0.9
2,775,442	-				+0.1
2,775,488	-				+0.5
2,775,583	+	ypjF	b2646	0.33	+0.3
2,775,646	+	ypjF	b2646	0.52	+0.4
2,775,808	+				-0.6
2,775,833	-				+0.1
2,776,013	-				+0.6
2,776,146	-				+0.2
2,776,375	+				+0.3
2,776,406	-				+0.4
2,776,438	-				-0.4
2,776,438	-				-0.0
2,776,555	-				+0.6
2,776,611	+				-0.1
2,776,631	-	ypjA	b2647	0.10	+0.1
2,776,751	+	ypjA	b2647	0.13	-0.1
2,776,766	+	ypjA	b2647	0.13	-0.3
2,776,766	+	ypjA	b2647	0.13	-1.0