Strain Fitness in Escherichia coli BW25113 around b2580

Experiment: Ying_all64 rep A; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep A; time point 3
2,713,815	+	yfiK	b2578	0.63	+0.1
2,713,815	+	yfiK	b2578	0.63	-0.3
2,713,815	+	yfiK	b2578	0.63	+0.3
2,713,815	+	yfiK	b2578	0.63	-0.5
2,713,833	+	yfiK	b2578	0.66	-0.5
2,713,833	+	yfiK	b2578	0.66	-0.1
2,714,065	-				+0.2
2,714,072	+				+0.3
2,714,072	+				-0.6
2,714,093	+				-0.2
2,714,105	+				+0.3
2,714,129	+	yfiD	b2579	0.11	+0.7
2,714,220	+	yfiD	b2579	0.34	-0.1
2,714,220	+	yfiD	b2579	0.34	-0.1
2,714,255	+	yfiD	b2579	0.43	+0.1
2,714,430	+	yfiD	b2579	0.89	-0.4
2,714,557	-				+0.2
2,714,557	-				+0.4
2,714,652	-				+0.3
2,714,777	-				+0.3
2,714,937	-	ung	b2580	0.23	+0.4
2,714,940	+	ung	b2580	0.24	-0.1
2,714,978	+	ung	b2580	0.29	+0.2
2,715,050	+	ung	b2580	0.40	+0.2
2,715,089	+	ung	b2580	0.45	+0.5
2,715,121	+	ung	b2580	0.50	+0.2
2,715,161	+	ung	b2580	0.56	-0.0
2,715,195	-	ung	b2580	0.61	+0.4
2,715,311	+	ung	b2580	0.78	+0.2
2,715,451	+				+0.2
2,715,608	+				-0.6
2,715,654	+	yfiF	b2581	0.14	+0.3
2,715,706	+	yfiF	b2581	0.19	+0.1
2,715,746	-	yfiF	b2581	0.22	+0.1
2,715,854	+	yfiF	b2581	0.33	-0.1
2,715,879	-	yfiF	b2581	0.35	-0.3
2,715,997	+	yfiF	b2581	0.47	-0.4
2,715,997	+	yfiF	b2581	0.47	+0.4
2,715,997	+	yfiF	b2581	0.47	+0.7
2,715,997	+	yfiF	b2581	0.47	+0.1
2,716,005	-	yfiF	b2581	0.47	+0.3
2,716,005	-	yfiF	b2581	0.47	+0.4
2,716,005	-	yfiF	b2581	0.47	-0.3
2,716,005	-	yfiF	b2581	0.47	+0.1
2,716,141	+	yfiF	b2581	0.61	+0.6
2,716,141	+				-0.5
2,716,183	-	yfiF	b2581	0.65	-0.2
2,716,183	-	yfiF	b2581	0.65	-0.3
2,716,229	+	yfiF	b2581	0.69	+0.1
2,716,265	-	yfiF	b2581	0.72	-1.3
2,716,265	-	yfiF	b2581	0.72	-0.8
2,716,313	+	yfiF	b2581	0.77	+0.1
2,716,313	+	yfiF	b2581	0.77	-0.3
2,716,387	-	yfiF	b2581	0.84	-1.1
2,716,387	-	yfiF	b2581	0.84	+0.3
2,716,440	+	yfiF	b2581	0.89	-0.0
2,716,446	+	yfiF	b2581	0.90	+0.1