Strain Fitness in Escherichia coli BW25113 around b2536

Experiment: Ying_all64 rep A; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep A; time point 3
2,663,733	-	csiE	b2535	0.22	+0.5
2,663,733	-	csiE	b2535	0.22	-0.7
2,663,745	-	csiE	b2535	0.22	+0.8
2,663,849	-	csiE	b2535	0.31	-0.1
2,663,927	+	csiE	b2535	0.37	-1.2
2,663,945	-	csiE	b2535	0.38	+0.6
2,663,945	-	csiE	b2535	0.38	+0.5
2,663,956	-	csiE	b2535	0.39	-0.4
2,663,956	-	csiE	b2535	0.39	+0.1
2,663,956	-	csiE	b2535	0.39	+0.1
2,663,981	+	csiE	b2535	0.41	+0.1
2,663,983	-	csiE	b2535	0.41	-0.1
2,664,044	+	csiE	b2535	0.46	+0.5
2,664,044	+	csiE	b2535	0.46	+0.2
2,664,058	+	csiE	b2535	0.47	+0.3
2,664,091	-	csiE	b2535	0.49	-0.5
2,664,091	-	csiE	b2535	0.49	+0.3
2,664,151	-	csiE	b2535	0.54	+0.6
2,664,151	-	csiE	b2535	0.54	-0.4
2,664,172	-	csiE	b2535	0.56	+0.1
2,664,242	+	csiE	b2535	0.61	+0.2
2,664,242	+	csiE	b2535	0.61	+0.2
2,664,242	+	csiE	b2535	0.61	-0.1
2,664,305	-	csiE	b2535	0.66	-0.2
2,664,315	-	csiE	b2535	0.67	-0.3
2,664,315	-	csiE	b2535	0.67	+0.1
2,664,317	+	csiE	b2535	0.67	-0.0
2,664,324	+	csiE	b2535	0.68	-0.4
2,664,326	+	csiE	b2535	0.68	+0.3
2,664,329	+	csiE	b2535	0.68	+0.1
2,664,329	+	csiE	b2535	0.68	+0.2
2,664,329	+	csiE	b2535	0.68	-1.0
2,664,349	+	csiE	b2535	0.70	-0.1
2,664,502	-	csiE	b2535	0.82	-0.4
2,664,535	-	csiE	b2535	0.84	-0.3
2,664,569	+	csiE	b2535	0.87	-0.0
2,664,629	+				-0.3
2,664,637	-				-0.2
2,664,637	-				+0.0
2,664,673	+				-0.4
2,664,681	-				+1.1
2,664,681	-				+0.6
2,664,687	+				-0.2
2,664,696	+				-0.2
2,664,732	+				+0.2
2,664,790	+				+0.3
2,664,890	+	hcaT	b2536	0.14	+0.0
2,664,933	-	hcaT	b2536	0.18	+0.2
2,665,029	+	hcaT	b2536	0.26	+0.0
2,665,232	+	hcaT	b2536	0.44	+0.8
2,665,232	+	hcaT	b2536	0.44	-0.0
2,665,242	+	hcaT	b2536	0.45	+0.1
2,665,242	+	hcaT	b2536	0.45	+0.1
2,665,318	-	hcaT	b2536	0.52	+0.3
2,665,358	+	hcaT	b2536	0.55	+0.2
2,665,358	+	hcaT	b2536	0.55	+0.8
2,665,375	+	hcaT	b2536	0.57	+0.0
2,665,375	+	hcaT	b2536	0.57	-0.2
2,665,383	-	hcaT	b2536	0.57	+0.2
2,665,518	-	hcaT	b2536	0.69	-0.1
2,665,518	-	hcaT	b2536	0.69	+0.6
2,665,530	-	hcaT	b2536	0.70	+0.5
2,665,530	-	hcaT	b2536	0.70	+0.5
2,665,556	+	hcaT	b2536	0.73	+0.6
2,665,556	+	hcaT	b2536	0.73	+0.3
2,665,794	-				+0.4
2,665,794	-				+0.1
2,665,833	+				-0.1
2,665,833	+				-1.1
2,665,896	-				+0.0
2,665,896	-				-0.3
2,665,896	-				-0.3
2,665,896	-				+0.2
2,665,960	+				-0.1
2,666,111	-				+0.2
2,666,203	-	hcaR	b2537	0.20	+0.1
2,666,213	+	hcaR	b2537	0.21	+0.2
2,666,213	+	hcaR	b2537	0.21	-0.1
2,666,216	-	hcaR	b2537	0.21	+0.0
2,666,269	-	hcaR	b2537	0.27	+0.1
2,666,334	-	hcaR	b2537	0.34	-0.0
2,666,359	+	hcaR	b2537	0.37	+0.0
2,666,361	+	hcaR	b2537	0.37	+0.1
2,666,389	-	hcaR	b2537	0.41	+0.3
2,666,389	-	hcaR	b2537	0.41	+0.0
2,666,551	+	hcaR	b2537	0.59	-2.1
2,666,563	+	hcaR	b2537	0.60	+0.1
2,666,824	+	hcaR	b2537	0.89	-0.6
2,666,839	-				-0.1