Strain Fitness in Escherichia coli BW25113 around b2447

Experiment: Ying_all64 rep A; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep A; time point 3
2,559,699	+	yffN	b2445	0.14	+0.1
2,559,794	-	yffN	b2445	0.40	+0.9
2,559,794	-	yffN	b2445	0.40	+0.4
2,559,897	+	yffN	b2445	0.68	+0.3
2,559,897	+	yffN	b2445	0.68	-0.2
2,559,915	-	yffN	b2445	0.73	-0.1
2,559,941	-	yffN	b2445	0.80	+1.0
2,560,369	-	yffO	b2446	0.57	+0.5
2,560,487	+	yffO	b2446	0.85	+0.0
2,560,549	+				+0.0
2,560,616	-	yffP	b2447	0.12	+0.2
2,560,683	+	yffP	b2447	0.23	+0.4
2,560,683	+	yffP	b2447	0.23	+0.2
2,560,876	-	yffP	b2447	0.56	-0.3
2,560,889	-	yffP	b2447	0.58	-0.0
2,561,041	-	yffP	b2447	0.83	+1.1
2,561,297	-				-0.2
2,561,297	-				+0.3
2,561,561	+				+0.6
2,561,561	+				-0.3
2,561,607	-				-0.8
2,561,652	-	yffQ	b2448	0.10	-1.2
2,561,668	-	yffQ	b2448	0.14	+0.7
2,561,668	-	yffQ	b2448	0.14	+0.1
2,561,805	+	yffQ	b2448	0.51	+0.6
2,561,872	-	yffQ	b2448	0.68	-0.0
2,561,872	-	yffQ	b2448	0.68	+0.0
2,561,872	-	yffQ	b2448	0.68	+1.0
2,561,964	+				+0.9
2,561,964	+				-0.4
2,562,073	+	yffR	b2449	0.18	-0.0
2,562,073	+	yffR	b2449	0.18	+0.3
2,562,092	+	yffR	b2449	0.23	-0.5
2,562,092	+	yffR	b2449	0.23	+0.1
2,562,114	+	yffR	b2449	0.28	-0.0
2,562,122	-	yffR	b2449	0.31	+0.7