Strain Fitness in Escherichia coli BW25113 around b1971

Experiment: Ying_all64 rep A; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep A; time point 3
2,036,581	-	yedW	b1969	0.60	+0.2
2,036,582	+	yedW	b1969	0.60	-2.3
2,036,582	+	yedW	b1969	0.60	+0.4
2,036,582	+	yedW	b1969	0.60	+1.8
2,036,583	-	yedW	b1969	0.61	+0.2
2,036,583	-	yedW	b1969	0.61	+1.2
2,036,589	-	yedW	b1969	0.61	+0.2
2,036,591	-	yedW	b1969	0.62	+0.0
2,036,591	-	yedW	b1969	0.62	-0.2
2,036,591	-	yedW	b1969	0.62	-0.0
2,036,593	+	yedW	b1969	0.62	-0.6
2,036,606	-	yedW	b1969	0.64	+0.8
2,036,608	-	yedW	b1969	0.64	-1.5
2,036,608	-	yedW	b1969	0.64	+1.1
2,036,683	-	yedW	b1969	0.75	-0.2
2,036,688	+	yedW	b1969	0.76	+1.8
2,036,719	-	yedW	b1969	0.81	-1.3
2,036,719	-	yedW	b1969	0.81	-0.7
2,036,721	-	yedW	b1969	0.81	+1.8
2,036,732	+	yedW	b1969	0.83	+1.8
2,036,734	+	yedW	b1969	0.83	+0.2
2,036,757	+	yedW	b1969	0.86	+0.4
2,036,757	+	yedW	b1969	0.86	+1.2
2,036,766	+	yedW	b1969	0.88	+1.3
2,036,780	+				+0.4
2,036,788	-				+0.8
2,036,790	+				-0.3
2,036,790	+				-0.1
2,036,790	+				-0.1
2,036,791	+				-0.3
2,036,798	-				+1.8
2,036,798	-				+0.8
2,036,801	+				-0.0
2,036,805	+				+0.3
2,036,871	+				+1.8
2,036,913	+				+0.6
2,036,913	+				-0.5
2,036,922	-				-1.4
2,036,927	-				+0.5
2,036,927	-				-0.2
2,036,927	-				+0.3
2,036,934	+				-0.2
2,036,934	+				+0.2
2,036,946	+				-0.3
2,036,970	+				+0.5
2,036,995	+				+1.8
2,036,995	+				+0.2
2,037,001	-				+1.2
2,037,003	-				+0.4
2,037,003	-				+0.9
2,037,009	+				+1.8
2,037,013	-				-1.4
2,037,013	-				+0.2
2,037,052	-	yedX	b1970	0.17	+0.4
2,037,060	+	yedX	b1970	0.19	+0.8
2,037,102	-	yedX	b1970	0.29	+1.8
2,037,102	-	yedX	b1970	0.29	+1.2
2,037,112	-	yedX	b1970	0.32	+1.8
2,037,118	+	yedX	b1970	0.33	+1.0
2,037,150	+	yedX	b1970	0.41	-0.4
2,037,150	+	yedX	b1970	0.41	+0.5
2,037,150	+	yedX	b1970	0.41	-0.5
2,037,198	+	yedX	b1970	0.53	-0.6
2,037,207	-	yedX	b1970	0.55	+0.2
2,037,212	+	yedX	b1970	0.56	+0.4
2,037,312	-	yedX	b1970	0.80	+1.2
2,037,332	+	yedX	b1970	0.85	-0.0
2,037,335	+	yedX	b1970	0.86	-0.2
2,037,389	-				-0.2
2,037,438	-				+0.1
2,037,438	-				-0.5
2,037,448	-				-0.9
2,037,465	+				-1.0
2,037,623	-	yedY	b1971	0.12	+0.9
2,037,623	-	yedY	b1971	0.12	-0.1
2,037,648	+	yedY	b1971	0.15	+0.9
2,037,689	+	yedY	b1971	0.19	+2.0
2,037,689	+	yedY	b1971	0.19	+1.0
2,037,889	+	yedY	b1971	0.39	+0.2
2,037,918	-	yedY	b1971	0.41	+0.2
2,037,940	+	yedY	b1971	0.44	-0.0
2,038,260	+	yedY	b1971	0.75	+0.7
2,038,260	+	yedY	b1971	0.75	-0.5
2,038,260	+	yedY	b1971	0.75	+0.8
2,038,273	-	yedY	b1971	0.77	-1.4
2,038,370	+	yedY	b1971	0.86	-0.4
2,038,378	-	yedY	b1971	0.87	+0.6
2,038,378	-	yedY	b1971	0.87	+0.3
2,038,704	+	yedZ	b1972	0.31	+0.1
2,038,748	+	yedZ	b1972	0.38	+0.0
2,038,750	+	yedZ	b1972	0.38	-0.2
2,038,787	+	yedZ	b1972	0.44	+0.3
2,038,787	+	yedZ	b1972	0.44	+0.3
2,038,951	-	yedZ	b1972	0.70	-0.2
2,038,951	-	yedZ	b1972	0.70	+0.6
2,038,989	-	yedZ	b1972	0.76	+0.2
2,039,002	-	yedZ	b1972	0.78	+0.0
2,039,037	+	yedZ	b1972	0.83	+0.1
2,039,052	+	yedZ	b1972	0.86	-1.2
2,039,052	+	yedZ	b1972	0.86	+0.1
2,039,211	-				+0.4
2,039,216	-				+0.4
2,039,429	+				-0.5
2,039,439	+				-0.0
2,039,439	+				+0.4
2,039,451	+				+0.0
2,039,472	+	yodA	b1973	0.11	-0.3
2,039,479	+	yodA	b1973	0.12	+0.2
2,039,479	+	yodA	b1973	0.12	-1.5
2,039,487	-	yodA	b1973	0.14	-0.1
2,039,499	-	yodA	b1973	0.15	+0.3
2,039,499	-	yodA	b1973	0.15	-0.1