Strain Fitness in Escherichia coli BW25113 around b1854

Experiment: Ying_all64 rep A; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep A; time point 3
1,934,818	+	yebK	b1853	0.16	-0.5
1,934,893	+	yebK	b1853	0.25	+0.6
1,935,346	-	yebK	b1853	0.77	-0.4
1,935,359	+	yebK	b1853	0.79	-0.1
1,935,869	-	pykA	b1854	0.14	+0.1
1,935,871	+	pykA	b1854	0.14	+0.2
1,935,919	-	pykA	b1854	0.17	+0.0
1,935,919	-	pykA	b1854	0.17	+0.2
1,935,962	+	pykA	b1854	0.20	-0.1
1,935,962	+	pykA	b1854	0.20	-0.1
1,935,979	+	pykA	b1854	0.21	-0.2
1,936,028	+	pykA	b1854	0.25	-0.1
1,936,028	+	pykA	b1854	0.25	+0.1
1,936,223	-	pykA	b1854	0.38	-0.2
1,936,241	-	pykA	b1854	0.39	-0.7
1,936,241	-	pykA	b1854	0.39	-0.4
1,936,292	-	pykA	b1854	0.43	-0.8
1,936,299	-	pykA	b1854	0.43	-0.4
1,936,412	-	pykA	b1854	0.51	+0.2
1,936,581	-	pykA	b1854	0.63	+0.0
1,936,581	-	pykA	b1854	0.63	-0.0
1,936,802	-	pykA	b1854	0.78	+0.3
1,936,805	+	pykA	b1854	0.78	+0.4
1,936,823	-	pykA	b1854	0.80	-0.1
1,936,823	-	pykA	b1854	0.80	+0.6
1,937,235	-				+0.4
1,937,235	-				-0.0
1,937,580	-	lpxM	b1855	0.34	-1.0
1,937,674	+	lpxM	b1855	0.44	-0.8
1,937,696	+	lpxM	b1855	0.46	-1.3
1,937,696	+	lpxM	b1855	0.46	-0.9
1,937,738	-	lpxM	b1855	0.51	-1.4
1,937,742	+	lpxM	b1855	0.51	-1.2
1,937,844	+	lpxM	b1855	0.62	-1.2
1,937,989	+	lpxM	b1855	0.76	-0.9
1,937,997	+	lpxM	b1855	0.77	-0.6
1,938,027	-	lpxM	b1855	0.80	-0.3