Strain Fitness in Escherichia coli BW25113 around b1784
Experiment: Ying_all64 rep A; time point 3
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Ying_all64 rep A; time point 3 |
---|---|---|---|---|---|
remove | |||||
1,866,001 | + | yeaG | b1783 | 0.55 | +0.6 |
1,866,009 | - | yeaG | b1783 | 0.56 | +0.5 |
1,866,158 | + | yeaG | b1783 | 0.63 | +0.3 |
1,866,158 | + | yeaG | b1783 | 0.63 | +0.2 |
1,866,313 | - | yeaG | b1783 | 0.71 | +0.6 |
1,866,545 | - | yeaG | b1783 | 0.83 | +0.4 |
1,866,658 | + | yeaG | b1783 | 0.89 | +0.3 |
1,866,698 | + | +0.4 | |||
1,866,698 | + | -0.4 | |||
1,866,706 | - | -0.1 | |||
1,866,877 | - | +0.4 | |||
1,866,880 | + | -0.1 | |||
1,866,928 | - | +0.1 | |||
1,866,928 | - | +0.4 | |||
1,867,119 | - | yeaH | b1784 | 0.11 | +0.7 |
1,867,362 | - | yeaH | b1784 | 0.30 | +0.4 |
1,867,362 | - | yeaH | b1784 | 0.30 | -0.3 |
1,867,578 | + | yeaH | b1784 | 0.47 | +0.5 |
1,867,578 | + | yeaH | b1784 | 0.47 | +0.8 |
1,867,694 | + | yeaH | b1784 | 0.56 | +0.2 |
1,867,723 | + | yeaH | b1784 | 0.58 | -0.8 |
1,867,772 | - | yeaH | b1784 | 0.62 | +1.2 |
1,867,803 | + | yeaH | b1784 | 0.64 | +0.7 |
1,867,803 | + | yeaH | b1784 | 0.64 | +0.3 |
1,867,843 | + | yeaH | b1784 | 0.67 | +0.8 |
1,867,941 | + | yeaH | b1784 | 0.75 | +0.6 |
1,867,984 | - | yeaH | b1784 | 0.78 | +2.7 |
1,868,025 | - | yeaH | b1784 | 0.81 | -0.6 |
1,868,179 | + | +0.8 | |||
1,868,219 | + | +1.1 | |||
1,868,224 | + | -0.1 | |||
1,868,238 | + | +0.3 | |||
1,868,238 | + | +1.4 | |||
1,868,275 | + | +0.4 |
Or see this region's nucleotide sequence