Strain Fitness in Escherichia coli BW25113 around b1600

Experiment: Ying_all64 rep A; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep A; time point 3
1,670,161	-	ydgD	b1598	0.22	+0.2
1,670,248	+	ydgD	b1598	0.32	-0.1
1,670,337	-	ydgD	b1598	0.43	-0.2
1,670,575	+	ydgD	b1598	0.72	+0.5
1,670,673	-	ydgD	b1598	0.84	+0.2
1,671,156	-				-0.1
1,671,156	-				+0.1
1,671,165	-				-0.1
1,671,182	-				-0.1
1,671,186	+				-1.2
1,671,251	-	mdtJ	b1600	0.25	-1.2
1,671,253	-	mdtJ	b1600	0.25	+0.2
1,671,346	+	mdtJ	b1600	0.51	+1.7
1,671,348	-	mdtJ	b1600	0.51	+0.5
1,671,348	-	mdtJ	b1600	0.51	+1.2
1,671,354	-	mdtJ	b1600	0.53	+0.3
1,671,354	-	mdtJ	b1600	0.53	+0.4
1,671,355	-	mdtJ	b1600	0.53	+0.5
1,671,449	-	mdtJ	b1600	0.79	+1.2
1,671,466	-	mdtJ	b1600	0.84	+1.7
1,671,466	-	mdtJ	b1600	0.84	+0.8
1,671,474	-	mdtJ	b1600	0.86	+1.7
1,671,525	-				-0.7
1,671,595	-				+0.7
1,671,615	-				+0.2
1,671,653	-				+0.3
1,671,653	-				+0.4
1,671,653	-				-0.4
1,671,653	-				-0.0
1,671,665	+				+1.7
1,671,761	-				-0.3
1,671,761	-				+0.9
1,671,761	-				+0.2
1,671,800	-				-0.5
1,671,800	-				-0.2
1,671,927	+				+1.7
1,671,935	+				+1.7
1,671,941	-				+0.1
1,671,943	-				+1.7
1,672,027	+				-0.3
1,672,082	-	ydgG	b1601	0.14	-0.6
1,672,082	-	ydgG	b1601	0.14	+0.3
1,672,095	-	ydgG	b1601	0.15	-2.6
1,672,095	-	ydgG	b1601	0.15	-0.6
1,672,095	-	ydgG	b1601	0.15	-0.3
1,672,102	-	ydgG	b1601	0.16	-0.4
1,672,106	+	ydgG	b1601	0.16	-1.6
1,672,151	-	ydgG	b1601	0.21	-0.2
1,672,157	-	ydgG	b1601	0.21	-0.1
1,672,291	-	ydgG	b1601	0.34	-0.7
1,672,365	+	ydgG	b1601	0.41	+0.0
1,672,365	+	ydgG	b1601	0.41	+0.1
1,672,413	+	ydgG	b1601	0.46	+0.2
1,672,481	+	ydgG	b1601	0.53	+0.2