Strain Fitness in Escherichia coli BW25113 around b1479

Experiment: Ying_all64 rep A; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep A; time point 3
1,551,011	+	adhP	b1478	0.16	+0.1
1,551,036	-	adhP	b1478	0.18	-0.5
1,551,421	+	adhP	b1478	0.56	-0.3
1,551,752	+	adhP	b1478	0.89	-0.1
1,551,859	+				-0.2
1,551,859	+				+0.8
1,551,871	-				+0.1
1,552,077	+				-0.1
1,552,077	+				-0.1
1,552,093	+				-0.5
1,552,254	-	sfcA	b1479	0.15	-0.1
1,552,274	-	sfcA	b1479	0.16	-0.5
1,552,501	+	sfcA	b1479	0.30	-0.5
1,552,509	-	sfcA	b1479	0.30	+0.2
1,552,509	-	sfcA	b1479	0.30	-0.6
1,552,638	-	sfcA	b1479	0.38	+0.6
1,552,638	-	sfcA	b1479	0.38	+1.0
1,553,155	+	sfcA	b1479	0.68	-0.1
1,553,284	-	sfcA	b1479	0.76	-0.3
1,553,427	+	sfcA	b1479	0.84	-0.7
1,553,435	-	sfcA	b1479	0.85	-1.3
1,553,588	+				-0.4
1,553,636	+				-0.5
1,553,636	+				-0.1
1,553,638	+				+0.2
1,553,647	+				-0.5
1,553,700	-				-0.2
1,553,833	+				+0.1
1,553,833	+				+0.8
1,553,951	+	sra	b1480	0.73	-0.6
1,553,951	+	sra	b1480	0.73	+0.6
1,553,951	+	sra	b1480	0.73	-0.3
1,554,079	+				-0.1
1,554,082	-				-0.6
1,554,097	-				-0.3
1,554,101	+				+0.9
1,554,111	-	b1481	b1481	0.10	+0.0
1,554,111	-	b1481	b1481	0.10	+0.4
1,554,123	-	b1481	b1481	0.16	+0.5
1,554,132	+	b1481	b1481	0.20	-0.4
1,554,144	-	b1481	b1481	0.25	-0.2
1,554,218	+	b1481	b1481	0.60	+0.4
1,554,224	-	b1481	b1481	0.62	+1.6
1,554,224	-	b1481	b1481	0.62	-0.7
1,554,244	-	b1481	b1481	0.72	-0.4
1,554,249	+	b1481	b1481	0.74	+0.2
1,554,257	-	b1481	b1481	0.78	+0.6
1,554,273	+	b1481	b1481	0.85	-1.5
1,554,355	-				+1.6
1,554,365	+				-1.4
1,554,407	+				+1.6
1,554,407	+				+0.6
1,554,599	+				+0.8
1,554,599	+				+0.1
1,554,601	+				+0.3
1,554,639	-				-0.7
1,554,678	+				+0.5
1,554,678	-				+0.6
1,554,684	-				-0.2