Strain Fitness in Escherichia coli BW25113 around b1244

Experiment: Ying_all64 rep A; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep A; time point 3
1,300,021	+	oppA	b1243	0.50	+0.6
1,300,152	+	oppA	b1243	0.58	+0.5
1,300,240	+	oppA	b1243	0.63	-0.1
1,300,243	-	oppA	b1243	0.64	+1.0
1,300,270	+	oppA	b1243	0.65	-0.0
1,300,530	+	oppA	b1243	0.81	+0.4
1,300,601	+	oppA	b1243	0.85	-0.3
1,300,601	+	oppA	b1243	0.85	+0.4
1,300,743	-				-1.1
1,300,801	+				-0.5
1,300,801	+				+0.2
1,300,894	+				+0.3
1,300,899	+				-0.3
1,300,899	+				+0.1
1,301,103	+	oppB	b1244	0.20	-0.1
1,301,303	+	oppB	b1244	0.41	+0.0
1,301,303	+	oppB	b1244	0.41	+0.4
1,301,303	+	oppB	b1244	0.41	-0.4
1,301,310	+	oppB	b1244	0.42	+0.2
1,301,311	-	oppB	b1244	0.42	+0.4
1,301,319	+	oppB	b1244	0.43	+0.2
1,301,322	-	oppB	b1244	0.43	+2.2
1,301,324	+	oppB	b1244	0.44	+0.4
1,301,324	+	oppB	b1244	0.44	+0.0
1,301,343	-	oppB	b1244	0.46	+0.2
1,301,581	+	oppB	b1244	0.71	+0.5
1,301,593	+	oppB	b1244	0.73	+0.1
1,301,631	-	oppB	b1244	0.77	+1.1
1,301,650	+	oppB	b1244	0.79	+0.7
1,301,735	+	oppB	b1244	0.88	+0.2
1,301,745	+	oppB	b1244	0.89	+0.8
1,301,745	+	oppB	b1244	0.89	+0.5
1,301,759	-				-0.1
1,301,921	-				-0.3
1,301,964	+	oppC	b1245	0.12	-0.4
1,301,982	+	oppC	b1245	0.14	+0.1
1,302,053	+	oppC	b1245	0.21	+0.1
1,302,057	-	oppC	b1245	0.22	-0.6
1,302,115	+	oppC	b1245	0.28	+0.2
1,302,115	+	oppC	b1245	0.28	-0.1
1,302,159	+	oppC	b1245	0.33	-0.3
1,302,379	-	oppC	b1245	0.57	-1.4
1,302,506	+	oppC	b1245	0.71	-0.1
1,302,506	+	oppC	b1245	0.71	+0.4
1,302,562	+	oppC	b1245	0.77	+0.4
1,302,650	+	oppC	b1245	0.87	+0.0
1,302,650	+	oppC	b1245	0.87	+0.1
1,302,671	+	oppC	b1245	0.89	+0.2
1,302,762	+				-0.1
1,302,762	+				-0.3
1,302,770	+				+0.4
1,302,770	+				+0.4
1,302,770	+				-0.4
1,302,812	+				-0.1
1,302,812	+				-0.0