Strain Fitness in Escherichia coli BW25113 around b0803
Experiment: Ying_all64 rep A; time point 3
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Ying_all64 rep A; time point 3 |
---|---|---|---|---|---|
remove | |||||
836,634 | - | +0.3 | |||
836,645 | + | -0.1 | |||
836,723 | - | -0.2 | |||
836,768 | - | +0.3 | |||
836,787 | - | -0.5 | |||
836,938 | + | ybiJ | b0802 | 0.19 | -0.3 |
837,079 | - | ybiJ | b0802 | 0.73 | -0.2 |
837,104 | + | ybiJ | b0802 | 0.83 | +0.2 |
837,196 | - | +0.4 | |||
837,320 | + | +0.6 | |||
837,320 | + | +2.2 | |||
837,320 | + | +0.1 | |||
837,320 | + | -0.0 | |||
837,389 | + | +1.2 | |||
837,406 | + | -1.9 | |||
837,438 | - | -0.2 | |||
837,438 | - | +0.6 | |||
837,446 | + | ybiI | b0803 | 0.12 | +0.2 |
837,550 | - | ybiI | b0803 | 0.51 | -0.5 |
837,567 | - | ybiI | b0803 | 0.58 | +1.1 |
837,576 | - | ybiI | b0803 | 0.61 | +0.0 |
837,630 | + | ybiI | b0803 | 0.81 | +0.6 |
837,638 | - | ybiI | b0803 | 0.84 | +0.4 |
837,723 | + | +0.4 | |||
837,800 | + | +0.3 | |||
837,853 | - | ybiX | b0804 | 0.15 | +0.2 |
838,096 | + | ybiX | b0804 | 0.51 | +0.0 |
838,096 | + | ybiX | b0804 | 0.51 | +0.4 |
838,140 | - | ybiX | b0804 | 0.57 | -0.3 |
838,140 | - | ybiX | b0804 | 0.57 | -0.3 |
838,195 | - | ybiX | b0804 | 0.65 | +0.3 |
838,195 | - | ybiX | b0804 | 0.65 | +0.5 |
838,195 | - | ybiX | b0804 | 0.65 | -0.4 |
838,253 | - | ybiX | b0804 | 0.74 | -0.2 |
838,511 | - | -0.0 | |||
838,511 | - | -0.2 | |||
838,519 | + | -0.3 | |||
838,563 | + | -0.2 | |||
838,596 | - | -0.6 |
Or see this region's nucleotide sequence