Strain Fitness in Escherichia coli BW25113 around b4614

Experiment: Ying_Others16 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep B; time point 2
3,719,105	+	insJ	b3557	0.77	-0.2
3,719,113	+	insJ	b3557	0.79	-1.1
3,719,266	+				-1.4
3,719,283	-				+0.4
3,719,334	+	insK	b3558	0.13	-1.1
3,719,337	+	insK	b3558	0.14	+0.1
3,719,337	+	insK	b3558	0.14	-2.7
3,719,337	+	insK	b3558	0.14	+0.4
3,719,337	+	insK	b3558	0.14	+0.2
3,719,400	-	insK	b3558	0.21	-1.1
3,719,408	-	insK	b3558	0.22	+0.7
3,719,408	-	insK	b3558	0.22	+0.3
3,719,408	-	insK	b3558	0.22	+1.1
3,719,413	-	insK	b3558	0.23	+0.3
3,719,431	-	insK	b3558	0.25	-0.4
3,719,431	-	insK	b3558	0.25	-0.6
3,719,445	+	insK	b3558	0.26	-0.8
3,719,466	+	insK	b3558	0.29	-1.1
3,719,476	-	insK	b3558	0.30	-0.1
3,719,493	+	insK	b3558	0.32	+0.1
3,719,499	+	insK	b3558	0.33	-4.0
3,719,512	-	insK	b3558	0.34	+0.2
3,719,514	+	insK	b3558	0.34	+3.7
3,719,514	+	insK	b3558	0.34	+0.6
3,719,520	-	insK	b3558	0.35	+2.2
3,719,520	-	insK	b3558	0.35	-1.2
3,719,522	+	insK	b3558	0.35	-0.3
3,719,531	-	insK	b3558	0.36	+0.0
3,719,531	-	insK	b3558	0.36	-1.2
3,719,531	-	insK	b3558	0.36	+0.0
3,719,533	+	insK	b3558	0.37	-0.2
3,719,533	+	insK	b3558	0.37	-0.5
3,719,535	-	insK	b3558	0.37	+1.3
3,719,543	+	insK	b3558	0.38	+1.0
3,719,545	+	insK	b3558	0.38	-0.1
3,719,570	+	insK	b3558	0.41	-2.4
3,719,570	+	insK	b3558	0.41	+0.8
3,719,584	+	insK	b3558	0.43	+2.2
3,719,611	+	insK	b3558	0.46	-0.6
3,719,637	+	insK	b3558	0.49	-1.1
3,719,648	+	insK	b3558	0.50	+0.5
3,719,648	+	insK	b3558	0.50	-0.7
3,719,650	+	insK	b3558	0.50	+1.6
3,719,673	+	insK	b3558	0.53	+0.1
3,719,680	+	insK	b3558	0.54	+0.5
3,719,697	-	insK	b3558	0.56	-1.4
3,719,701	+	insK	b3558	0.56	-0.6
3,719,701	-	insK	b3558	0.56	-0.4
3,719,701	-	insK	b3558	0.56	+0.8
3,719,722	-	insK	b3558	0.59	+2.6
3,719,756	-	insK	b3558	0.63	+0.4
3,719,762	+	insK	b3558	0.63	+0.6
3,719,765	+	insK	b3558	0.64	-0.4
3,719,768	+	insK	b3558	0.64	+0.0
3,719,770	+	insK	b3558	0.64	+0.6
3,719,770	+	insK	b3558	0.64	-0.1
3,719,770	+	insK	b3558	0.64	+1.6
3,719,770	+	insK	b3558	0.64	+0.6
3,719,770	+	insK	b3558	0.64	+1.5
3,719,770	+	insK	b3558	0.64	-0.2
3,719,772	+	insK	b3558	0.65	-2.9
3,719,772	+	insK	b3558	0.65	+0.2
3,719,772	+	insK	b3558	0.65	-2.2
3,719,772	+	insK	b3558	0.65	-0.1
3,719,776	-	insK	b3558	0.65	+1.6
3,719,776	-	insK	b3558	0.65	+0.8
3,719,778	-	insK	b3558	0.65	+0.2
3,719,778	-	insK	b3558	0.65	+2.4
3,719,780	+	insK	b3558	0.66	+1.1
3,719,780	+	insK	b3558	0.66	+0.0
3,719,780	+	insK	b3558	0.66	-0.1
3,719,780	+	insK	b3558	0.66	-1.2
3,719,780	-	insK	b3558	0.66	-2.2
3,719,782	+	insK	b3558	0.66	-1.2
3,719,782	+	insK	b3558	0.66	+0.5
3,719,782	+	insK	b3558	0.66	+0.0
3,719,782	+	insK	b3558	0.66	-1.9
3,719,786	+	insK	b3558	0.66	+0.3
3,719,786	+	insK	b3558	0.66	+2.2
3,719,787	+	insK	b3558	0.66	-0.7
3,719,788	+	insK	b3558	0.67	+1.8
3,719,790	-	insK	b3558	0.67	-1.5
3,719,790	-	insK	b3558	0.67	+2.9
3,719,790	-	insK	b3558	0.67	+0.2
3,719,790	-	insK	b3558	0.67	-1.8
3,719,793	+	insK	b3558	0.67	+0.1
3,719,795	-	insK	b3558	0.67	+1.8
3,719,796	+	insK	b3558	0.67	+2.7
3,719,816	+	insK	b3558	0.70	+0.4
3,719,816	+	insK	b3558	0.70	+0.6
3,719,869	+	insK	b3558	0.76	+0.7
3,719,870	+	insK	b3558	0.76	+1.1
3,719,884	+	insK	b3558	0.78	-2.1
3,719,884	+	insK	b3558	0.78	-0.8
3,719,884	+	insK	b3558	0.78	+0.3
3,719,887	-	insK	b3558	0.78	+3.4
3,719,887	-	insK	b3558	0.78	+0.4
3,719,894	+	insK	b3558	0.79	+0.1
3,719,894	+	insK	b3558	0.79	+1.4
3,719,906	+	insK	b3558	0.80	+2.1
3,719,906	+	insK	b3558	0.80	-0.3
3,719,906	+	insK	b3558	0.80	+1.6
3,719,906	+	insK	b3558	0.80	-0.3
3,719,906	+	insK	b3558	0.80	-0.2
3,719,921	+	insK	b3558	0.82	+0.5
3,719,931	+	insK	b3558	0.83	-0.6
3,719,936	+	insK	b3558	0.84	+0.3
3,719,937	+	insK	b3558	0.84	+1.0
3,719,937	+	insK	b3558	0.84	-0.6
3,719,942	+	insK	b3558	0.85	+1.0
3,719,944	+	insK	b3558	0.85	-2.5
3,719,948	+	insK	b3558	0.85	-2.5
3,719,948	+	insK	b3558	0.85	-2.4
3,719,963	+	insK	b3558	0.87	-0.2
3,719,963	+	insK	b3558	0.87	+0.1
3,719,996	+				+0.4
3,720,051	+				+1.4
3,720,059	-				-0.7
3,720,059	-				-0.5
3,720,062	-				-0.1
3,720,065	+				+0.8
3,720,065	+				+1.2
3,720,065	+				+0.2
3,720,073	-				+2.4
3,720,073	-				+3.4
3,720,073	-				+0.8
3,720,073	-				+0.1
3,720,073	-				+0.4
3,720,073	-				-0.5
3,720,094	+				+0.0
3,720,094	+				-0.9
3,720,102	-	sokA	b4614	0.10	+0.6
3,720,102	-	sokA	b4614	0.10	+1.6
3,720,102	-	sokA	b4614	0.10	+2.9
3,720,102	-	sokA	b4614	0.10	+2.1
3,720,102	-	sokA	b4614	0.10	-2.0
3,720,102	-	sokA	b4614	0.10	+0.8
3,720,115	-	sokA	b4614	0.53	-2.4
3,720,115	-	sokA	b4614	0.53	+0.3
3,720,115	-	sokA	b4614	0.53	-0.4
3,720,115	-	sokA	b4614	0.53	-0.5
3,720,160	-				-0.3
3,720,169	+				-0.2
3,720,169	+				+0.5
3,720,175	+				-1.0
3,720,183	-				+3.4
3,720,187	-				+3.4
3,720,187	-				-0.8
3,720,261	-				-0.7
3,720,278	-				+0.6