Strain Fitness in Escherichia coli BW25113 around b2635
Experiment: Ying_Others16 rep B; time point 2
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Ying_Others16 rep B; time point 2 |
---|---|---|---|---|---|
remove | |||||
2,767,519 | + | -0.4 | |||
2,767,563 | + | -0.3 | |||
2,767,605 | + | -3.6 | |||
2,767,649 | + | -1.0 | |||
2,767,658 | - | -0.1 | |||
2,767,904 | + | yfjR | b2634 | 0.25 | -1.2 |
2,768,029 | - | yfjR | b2634 | 0.43 | -0.6 |
2,768,215 | + | yfjR | b2634 | 0.70 | -2.6 |
2,768,258 | - | yfjR | b2634 | 0.76 | -0.5 |
2,768,258 | - | yfjR | b2634 | 0.76 | -0.0 |
2,768,388 | - | -0.1 | |||
2,768,429 | - | +0.1 | |||
2,768,429 | - | +0.1 | |||
2,768,437 | + | +0.2 | |||
2,768,445 | - | +0.3 | |||
2,768,460 | - | +0.6 | |||
2,768,470 | - | -2.3 | |||
2,768,582 | - | ypjK | b2635 | 0.49 | +0.7 |
2,768,582 | - | ypjK | b2635 | 0.49 | +0.4 |
2,768,582 | - | ypjK | b2635 | 0.49 | +1.1 |
2,768,791 | - | b2636 | b2636 | 0.20 | +0.3 |
2,768,810 | + | b2636 | b2636 | 0.24 | +0.3 |
2,768,843 | - | b2636 | b2636 | 0.32 | +0.0 |
2,768,845 | - | b2636 | b2636 | 0.32 | -1.2 |
2,768,919 | - | b2636 | b2636 | 0.49 | -0.5 |
2,768,941 | - | b2636 | b2636 | 0.54 | +0.9 |
2,768,941 | - | b2636 | b2636 | 0.54 | +1.2 |
2,769,051 | - | b2636 | b2636 | 0.78 | -0.2 |
2,769,064 | - | b2636 | b2636 | 0.81 | -1.3 |
2,769,064 | - | b2636 | b2636 | 0.81 | -0.3 |
2,769,099 | + | b2636 | b2636 | 0.89 | -1.5 |
2,769,099 | + | b2636 | b2636 | 0.89 | -0.7 |
2,769,118 | - | +1.0 | |||
2,769,242 | - | yfjT | b2637 | 0.15 | +0.1 |
2,769,288 | - | yfjT | b2637 | 0.25 | -0.2 |
2,769,528 | - | yfjT | b2637 | 0.76 | -2.0 |
2,769,528 | - | yfjT | b2637 | 0.76 | +1.0 |
2,769,650 | + | +0.7 | |||
2,769,650 | + | +0.2 | |||
2,769,658 | + | -0.3 |
Or see this region's nucleotide sequence