Strain Fitness in Escherichia coli BW25113 around b2385

Experiment: Ying_Others16 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep B; time point 2
2,502,656	-	ypdE	b2384	0.12	-0.1
2,502,774	+	ypdE	b2384	0.23	+1.1
2,502,774	+	ypdE	b2384	0.23	+0.4
2,503,000	+	ypdE	b2384	0.45	+1.2
2,503,000	+	ypdE	b2384	0.45	+0.3
2,503,120	+	ypdE	b2384	0.57	+0.6
2,503,260	+	ypdE	b2384	0.70	-0.2
2,503,260	+	ypdE	b2384	0.70	+0.8
2,503,268	-	ypdE	b2384	0.71	-0.0
2,503,268	-	ypdE	b2384	0.71	+0.3
2,503,268	-	ypdE	b2384	0.71	-1.4
2,503,386	-	ypdE	b2384	0.82	+1.2
2,503,386	-	ypdE	b2384	0.82	+1.4
2,503,409	-	ypdE	b2384	0.84	+0.1
2,503,711	-	ypdF	b2385	0.13	-0.1
2,503,814	-	ypdF	b2385	0.23	-0.7
2,503,814	-	ypdF	b2385	0.23	-2.1
2,503,814	-	ypdF	b2385	0.23	+0.2
2,504,007	-	ypdF	b2385	0.40	-0.6
2,504,097	+	ypdF	b2385	0.49	-2.5
2,504,097	+	ypdF	b2385	0.49	-0.6
2,504,187	+	ypdF	b2385	0.57	-0.3
2,504,205	+	ypdF	b2385	0.59	-0.8
2,504,261	+	ypdF	b2385	0.64	-2.2
2,504,472	+	ypdF	b2385	0.83	+0.5
2,504,568	+				+0.0
2,504,808	+	ypdG	b2386	0.11	-0.2
2,504,809	-	ypdG	b2386	0.11	+0.7
2,504,809	-	ypdG	b2386	0.11	-0.7
2,504,811	-	ypdG	b2386	0.11	-2.7
2,504,830	+	ypdG	b2386	0.13	+0.1
2,504,866	+	ypdG	b2386	0.16	-0.6
2,504,888	-	ypdG	b2386	0.18	-0.1
2,504,888	-	ypdG	b2386	0.18	+0.4
2,504,967	+	ypdG	b2386	0.24	-0.0
2,504,967	+	ypdG	b2386	0.24	+0.2
2,505,076	+	ypdG	b2386	0.33	+0.1
2,505,092	-	ypdG	b2386	0.34	+0.1
2,505,107	+	ypdG	b2386	0.35	+0.5
2,505,145	-	ypdG	b2386	0.38	+0.3
2,505,243	+	ypdG	b2386	0.46	+0.4
2,505,350	-	ypdG	b2386	0.55	+0.0
2,505,408	-	ypdG	b2386	0.59	+0.3
2,505,468	-	ypdG	b2386	0.64	-0.2
2,505,473	-	ypdG	b2386	0.64	-0.2
2,505,504	-	ypdG	b2386	0.67	-0.3
2,505,639	+	ypdG	b2386	0.78	-1.6
2,505,648	-	ypdG	b2386	0.78	+1.5
2,505,648	-	ypdG	b2386	0.78	+0.5