Strain Fitness in Escherichia coli BW25113 around b2286

Experiment: Ying_Others16 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep B; time point 2
2,399,113	-	nuoF	b2284	0.65	+1.2
2,399,283	-	nuoF	b2284	0.78	+1.3
2,399,293	-	nuoF	b2284	0.79	-2.1
2,399,314	-	nuoF	b2284	0.80	-1.2
2,399,405	-	nuoF	b2284	0.87	-0.2
2,399,405	-	nuoF	b2284	0.87	-1.8
2,399,406	-	nuoF	b2284	0.87	-1.7
2,399,461	+				-2.3
2,399,461	+				-1.0
2,399,508	-				-1.9
2,399,626	+				-0.8
2,399,626	+	nuoE	b2285	0.10	-1.9
2,399,725	+	nuoE	b2285	0.30	-0.1
2,399,863	-	nuoE	b2285	0.58	+2.6
2,399,948	-	nuoE	b2285	0.75	+0.8
2,399,972	+	nuoE	b2285	0.79	+0.1
2,400,031	-				-0.3
2,400,113	+				-1.9
2,400,113	+				-2.5
2,400,221	-				-1.8
2,400,221	-				-1.3
2,400,254	+				-0.0
2,400,254	-				-0.9
2,400,327	-	nuoC	b2286	0.14	+0.5
2,400,349	-	nuoC	b2286	0.15	-2.8
2,400,357	-	nuoC	b2286	0.16	-2.6
2,400,431	+	nuoC	b2286	0.20	-1.2
2,400,565	-	nuoC	b2286	0.27	-2.1
2,400,683	-	nuoC	b2286	0.34	-1.9
2,400,683	-	nuoC	b2286	0.34	-0.2
2,401,060	+	nuoC	b2286	0.55	-1.8
2,401,073	-	nuoC	b2286	0.56	+0.9
2,401,073	-	nuoC	b2286	0.56	-3.0
2,401,078	-	nuoC	b2286	0.56	-1.4
2,401,197	+	nuoC	b2286	0.63	+0.3
2,401,420	-	nuoC	b2286	0.75	-2.2
2,401,492	+	nuoC	b2286	0.79	-0.2
2,401,492	+	nuoC	b2286	0.79	+0.4
2,401,504	-	nuoC	b2286	0.80	+0.5
2,401,625	+	nuoC	b2286	0.86	-0.4
2,401,665	+	nuoC	b2286	0.89	-4.0
2,401,730	-				+0.6
2,401,730	-				-0.5
2,401,732	-				-1.4
2,401,732	-				-2.2
2,401,762	-				-1.9
2,401,767	-				+1.2
2,402,000	+				-2.9
2,402,085	-	nuoB	b2287	0.17	-1.2
2,402,169	+	nuoB	b2287	0.30	+1.7
2,402,169	+	nuoB	b2287	0.30	-0.5
2,402,179	-	nuoB	b2287	0.31	-1.0
2,402,212	-	nuoB	b2287	0.36	-2.1
2,402,284	+	nuoB	b2287	0.47	-0.3
2,402,378	-	nuoB	b2287	0.61	-2.0
2,402,386	-	nuoB	b2287	0.62	-1.5
2,402,386	-	nuoB	b2287	0.62	-1.3
2,402,434	+	nuoB	b2287	0.70	-0.9
2,402,434	+	nuoB	b2287	0.70	-0.9
2,402,583	+				+0.5
2,402,621	-				-0.6
2,402,624	+				-1.8
2,402,662	+				-2.8
2,402,662	+				-0.4
2,402,665	+				-0.8
2,402,665	+				-1.5
2,402,694	-				-1.0
2,402,723	+	nuoA	b2288	0.16	-0.9
2,402,723	+	nuoA	b2288	0.16	+0.6
2,402,745	+				+0.3
2,402,805	-	nuoA	b2288	0.35	-0.1
2,402,805	-	nuoA	b2288	0.35	-2.0
2,402,819	+	nuoA	b2288	0.38	-0.1