Strain Fitness in Escherichia coli BW25113 around b1408

Experiment: Ying_Others16 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep B; time point 2
1,474,854	+	ydbD	b1407	0.73	+2.9
1,474,889	+	ydbD	b1407	0.75	+1.9
1,474,897	-	ydbD	b1407	0.75	+2.9
1,474,943	-	ydbD	b1407	0.77	+1.3
1,475,091	-	ydbD	b1407	0.83	-0.1
1,475,101	+	ydbD	b1407	0.84	+1.9
1,475,101	-	ydbD	b1407	0.84	-0.3
1,475,134	-	ydbD	b1407	0.85	-0.8
1,475,145	+	ydbD	b1407	0.86	+1.9
1,475,145	+	ydbD	b1407	0.86	-0.4
1,475,145	-	ydbD	b1407	0.86	-0.3
1,475,145	-	ydbD	b1407	0.86	-0.3
1,475,155	-	ydbD	b1407	0.86	-2.6
1,475,183	+	ydbD	b1407	0.87	+2.9
1,475,232	+	ydbD	b1407	0.89	+1.3
1,475,242	+	ydbD	b1407	0.90	+0.9
1,475,254	+				+1.7
1,475,348	+				+1.3
1,475,383	-				+1.1
1,475,610	-				-0.1
1,475,691	-				+0.3
1,475,719	+	b1408	b1408	0.12	-2.1
1,475,771	+	b1408	b1408	0.21	-2.9
1,475,771	+	b1408	b1408	0.21	-0.6
1,475,790	+	b1408	b1408	0.24	-3.4
1,475,838	+	b1408	b1408	0.32	+0.3
1,475,838	+	b1408	b1408	0.32	-2.2
1,475,850	+	b1408	b1408	0.34	-0.9
1,475,850	+	b1408	b1408	0.34	-3.1
1,475,862	+	b1408	b1408	0.36	-2.4
1,475,862	+	b1408	b1408	0.36	-3.0
1,475,866	+	b1408	b1408	0.36	+0.6
1,475,866	+	b1408	b1408	0.36	-2.2
1,475,866	-	b1408	b1408	0.36	+1.3
1,475,903	+	b1408	b1408	0.43	+0.9
1,476,147	+	b1408	b1408	0.83	-0.8
1,476,147	+	b1408	b1408	0.83	+0.6
1,476,882	-	ynbB	b1409	0.70	+2.9
1,476,882	-	ynbB	b1409	0.70	+0.9
1,476,894	-	ynbB	b1409	0.72	+2.9
1,476,902	+	ynbB	b1409	0.73	-0.8
1,476,924	+	ynbB	b1409	0.75	-0.7
1,476,934	+	ynbB	b1409	0.76	+0.6
1,476,934	+	ynbB	b1409	0.76	+1.3
1,477,000	+	ynbB	b1409	0.84	+1.9
1,477,008	+	ynbB	b1409	0.85	-0.7
1,477,055	+	ynbB	b1409	0.90	+0.9
1,477,064	-				+1.9
1,477,066	+				+0.9
1,477,074	+				-1.0
1,477,088	+				+1.9
1,477,214	-				-1.0