Strain Fitness in Escherichia coli BW25113 around b1235

Experiment: Ying_Others16 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep B; time point 2
1,288,509	+				+0.8
1,288,510	+				-0.5
1,288,510	+				+0.1
1,288,514	+				-0.4
1,288,599	+	rssA	b1234	0.14	-2.2
1,288,690	+	rssA	b1234	0.25	-0.1
1,288,690	+	rssA	b1234	0.25	+0.9
1,288,713	+	rssA	b1234	0.27	+1.1
1,288,858	-	rssA	b1234	0.43	-0.5
1,288,883	-	rssA	b1234	0.46	+0.0
1,288,891	-	rssA	b1234	0.47	-0.6
1,288,924	-	rssA	b1234	0.50	-3.0
1,288,928	-	rssA	b1234	0.51	-0.4
1,288,928	-	rssA	b1234	0.51	-1.1
1,288,949	-	rssA	b1234	0.53	-1.6
1,288,949	-	rssA	b1234	0.53	-2.1
1,288,967	+	rssA	b1234	0.55	-2.9
1,289,015	+	rssA	b1234	0.60	+0.1
1,289,147	-	rssA	b1234	0.75	+0.3
1,289,214	-	rssA	b1234	0.82	-3.6
1,289,528	+				-2.6
1,289,631	-	rssB	b1235	0.16	-2.0
1,289,651	+	rssB	b1235	0.18	-3.5
1,289,651	+	rssB	b1235	0.18	-0.3
1,289,661	+	rssB	b1235	0.19	-1.1
1,289,686	+	rssB	b1235	0.22	-1.6
1,289,691	-	rssB	b1235	0.22	-1.4
1,289,753	-	rssB	b1235	0.28	-3.2
1,289,753	-	rssB	b1235	0.28	-0.0
1,289,829	+	rssB	b1235	0.36	-3.0
1,289,841	-	rssB	b1235	0.37	-2.2
1,289,841	-	rssB	b1235	0.37	-0.1
1,289,903	+	rssB	b1235	0.43	+0.1
1,289,903	+	rssB	b1235	0.43	-3.0
1,289,936	+	rssB	b1235	0.46	+0.9
1,289,940	+	rssB	b1235	0.47	-1.2
1,289,940	+	rssB	b1235	0.47	+0.6
1,289,962	+	rssB	b1235	0.49	+0.0
1,290,051	-	rssB	b1235	0.58	-1.8
1,290,082	-	rssB	b1235	0.61	-2.2
1,290,153	+	rssB	b1235	0.68	-1.5
1,290,202	-	rssB	b1235	0.73	-0.5
1,290,327	-	rssB	b1235	0.85	-1.1
1,290,359	-	rssB	b1235	0.88	-0.4
1,290,359	-	rssB	b1235	0.88	-2.5
1,290,401	+				-3.1
1,290,426	+				-2.0
1,290,431	+				-0.5
1,290,538	-				+2.9
1,290,593	+				-0.3
1,290,594	-				-0.5
1,290,594	-				+0.6
1,290,602	+				+0.5
1,290,606	+				-1.7
1,290,609	-				+0.2
1,290,609	-				-2.6
1,290,612	+				+0.0
1,290,612	+				+0.6
1,290,612	+				-0.2
1,290,622	+				-0.1
1,290,664	+				-0.8
1,290,672	-				+0.6
1,290,672	-				+2.9
1,290,672	-				+1.1
1,290,672	-				+1.7
1,290,737	+				+2.5
1,290,755	+				-1.0
1,290,775	-	galU	b1236	0.10	+3.7
1,290,785	-	galU	b1236	0.12	-1.7
1,290,903	+	galU	b1236	0.25	+1.6
1,290,903	+	galU	b1236	0.25	+2.3
1,290,969	+	galU	b1236	0.32	+0.0
1,291,001	+	galU	b1236	0.35	+0.6
1,291,027	-	galU	b1236	0.38	+2.0
1,291,030	+	galU	b1236	0.39	-0.3
1,291,044	-	galU	b1236	0.40	-0.3
1,291,047	+	galU	b1236	0.40	+0.9
1,291,048	+	galU	b1236	0.40	-1.4
1,291,048	+	galU	b1236	0.40	-1.3
1,291,048	+				+0.6
1,291,131	+	galU	b1236	0.50	+1.5
1,291,139	+	galU	b1236	0.50	+0.4
1,291,157	+	galU	b1236	0.52	-2.6
1,291,182	+	galU	b1236	0.55	+0.9
1,291,182	+	galU	b1236	0.55	+2.7
1,291,209	+	galU	b1236	0.58	+3.7
1,291,209	+	galU	b1236	0.58	+0.9
1,291,319	+				+0.1
1,291,375	+	galU	b1236	0.76	+0.3
1,291,375	+				-1.3
1,291,375	+	galU	b1236	0.76	+0.7
1,291,412	+	galU	b1236	0.81	+0.0
1,291,413	+	galU	b1236	0.81	+1.2
1,291,460	+	galU	b1236	0.86	-0.8