Strain Fitness in Escherichia coli BW25113 around b0889

Experiment: Ying_Others16 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep B; time point 2
930,848	-	trxB	b0888	0.56	-0.3
930,848	-	trxB	b0888	0.56	-1.4
930,863	+	trxB	b0888	0.57	+0.2
930,913	-	trxB	b0888	0.63	-0.6
930,939	+	trxB	b0888	0.65	+1.2
931,019	+	trxB	b0888	0.74	-1.0
931,137	-	trxB	b0888	0.86	+0.3
931,193	-				-2.4
931,215	-				-1.7
931,327	-				-1.0
931,327	-				-3.0
931,379	+				+0.5
931,411	+				-1.1
931,435	+				-1.9
931,641	-				-0.7
931,641	-				+0.4
931,721	-				+0.1
931,764	-				+1.3
931,764	-				-0.2
931,801	+				+0.6
931,856	-				+0.8
931,864	+				-2.4
931,937	+	lrp	b0889	0.24	+1.6
932,002	-	lrp	b0889	0.37	+1.5
932,002	-	lrp	b0889	0.37	+0.4
932,004	-	lrp	b0889	0.38	+2.9
932,066	-	lrp	b0889	0.50	+1.7
932,078	+	lrp	b0889	0.53	+2.3
932,331	-				-0.9
932,331	-				-1.4
932,353	-				+0.3
932,385	+				-0.1
932,385	+				-0.2
932,385	+				+1.3
932,430	+				-0.6
932,430	+				+0.0
932,614	+				+1.0
933,053	+	ftsK	b0890	0.15	-0.5
933,095	+	ftsK	b0890	0.16	+1.4
933,102	-	ftsK	b0890	0.16	+1.0
933,104	+	ftsK	b0890	0.16	-0.7