Strain Fitness in Escherichia coli BW25113 around b3581

Experiment: Ying_Others16 rep A; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep A; time point 2
3,745,629	-	lyxK	b3580	0.35	-0.3
3,745,652	+	lyxK	b3580	0.36	-0.1
3,745,666	+	lyxK	b3580	0.37	-0.1
3,745,712	-	lyxK	b3580	0.40	+0.5
3,745,727	+	lyxK	b3580	0.41	+4.1
3,745,728	+	lyxK	b3580	0.41	-0.2
3,745,767	-	lyxK	b3580	0.44	-2.4
3,745,785	+	lyxK	b3580	0.45	-3.1
3,745,881	-	lyxK	b3580	0.52	-0.6
3,745,881	-	lyxK	b3580	0.52	+0.5
3,745,900	-	lyxK	b3580	0.53	+0.6
3,745,973	+	lyxK	b3580	0.58	-0.6
3,745,973	+	lyxK	b3580	0.58	-1.6
3,746,056	-	lyxK	b3580	0.63	+0.3
3,746,056	-	lyxK	b3580	0.63	-0.3
3,746,070	+	lyxK	b3580	0.64	+1.3
3,746,086	+	lyxK	b3580	0.65	-0.5
3,746,133	+	lyxK	b3580	0.69	+1.2
3,746,138	-	lyxK	b3580	0.69	-1.0
3,746,181	+	lyxK	b3580	0.72	+0.7
3,746,181	+	lyxK	b3580	0.72	-0.1
3,746,198	-	lyxK	b3580	0.73	+0.3
3,746,198	-	lyxK	b3580	0.73	+1.2
3,746,286	+	lyxK	b3580	0.79	-0.5
3,746,293	+	lyxK	b3580	0.79	-1.8
3,746,295	-	lyxK	b3580	0.79	-2.4
3,746,295	-	lyxK	b3580	0.79	+0.4
3,746,349	+	lyxK	b3580	0.83	+1.0
3,746,349	+	lyxK	b3580	0.83	+0.1
3,746,399	+	lyxK	b3580	0.86	-1.8
3,746,399	+	lyxK	b3580	0.86	-0.1
3,746,423	+	lyxK	b3580	0.88	+0.4
3,746,457	+				+0.1
3,746,562	-				+0.2
3,746,570	-				-0.1
3,746,581	+				+0.4
3,746,594	+				-0.6
3,746,594	+				+0.3
3,746,596	+				-0.1
3,746,641	+				+0.1
3,746,643	-				-0.6
3,746,726	+	sgbH	b3581	0.19	-0.6
3,746,726	+	sgbH	b3581	0.19	-1.3
3,746,800	-	sgbH	b3581	0.30	+0.5
3,746,839	+	sgbH	b3581	0.36	+0.4
3,746,852	+	sgbH	b3581	0.38	-1.5
3,746,852	+	sgbH	b3581	0.38	-1.2
3,746,860	-	sgbH	b3581	0.39	-0.3
3,746,928	+	sgbH	b3581	0.49	-1.9
3,746,936	-	sgbH	b3581	0.51	-0.2
3,746,936	-	sgbH	b3581	0.51	-0.1
3,746,959	-	sgbH	b3581	0.54	+0.2
3,746,978	-	sgbH	b3581	0.57	-0.2
3,747,007	-	sgbH	b3581	0.61	-0.5
3,747,117	+	sgbH	b3581	0.78	-0.1
3,747,249	+				+0.1
3,747,600	+	sgbU	b3582	0.40	+0.1
3,747,626	+	sgbU	b3582	0.43	-1.4
3,747,694	+	sgbU	b3582	0.51	-0.5
3,747,819	-	sgbU	b3582	0.66	-1.0
3,747,881	+	sgbU	b3582	0.73	+0.9
3,747,923	+	sgbU	b3582	0.78	+0.9
3,748,022	-	sgbU	b3582	0.89	-0.4
3,748,022	-	sgbU	b3582	0.89	-0.6
3,748,034	+				+0.6
3,748,083	-				+0.9
3,748,103	+				+1.6
3,748,128	-				-1.2
3,748,226	-	sgbE	b3583	0.17	+0.1
3,748,237	+	sgbE	b3583	0.18	-0.2
3,748,237	+	sgbE	b3583	0.18	-0.7
3,748,253	+	sgbE	b3583	0.21	+0.1