Strain Fitness in Escherichia coli BW25113 around b3504

Experiment: Ying_Others16 rep A; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep A; time point 2
3,648,320	-	arsC	b3503	0.14	+0.4
3,648,320	-	arsC	b3503	0.14	+0.0
3,648,325	+	arsC	b3503	0.15	+0.3
3,648,391	+	arsC	b3503	0.31	-1.7
3,648,391	+	arsC	b3503	0.31	+0.7
3,648,458	-	arsC	b3503	0.46	-1.3
3,648,458	-	arsC	b3503	0.46	+1.0
3,648,461	-	arsC	b3503	0.47	-0.3
3,648,461	-	arsC	b3503	0.47	-0.3
3,648,559	+	arsC	b3503	0.70	-0.5
3,648,569	+	arsC	b3503	0.73	-0.2
3,648,582	-	arsC	b3503	0.76	+0.4
3,648,590	-	arsC	b3503	0.77	+0.8
3,648,638	-	arsC	b3503	0.89	+0.5
3,648,661	-				+0.3
3,648,663	+				+0.4
3,648,690	+				-0.0
3,648,697	+				+0.2
3,648,697	+				+0.8
3,648,701	+				-0.2
3,648,701	+				-0.5
3,648,753	-				+2.3
3,648,754	+				-0.7
3,648,754	+				-1.0
3,648,765	+				+1.2
3,648,809	+				+0.2
3,648,814	+				+1.0
3,648,836	+				+1.6
3,648,836	+				-2.5
3,648,844	+				+1.5
3,648,882	+				-0.2
3,648,891	+				+0.3
3,648,893	+				+0.1
3,648,893	+				-0.7
3,648,893	+				+1.6
3,648,893	+				+0.4
3,648,893	+				+1.0
3,648,893	+				-1.4
3,648,893	+				-0.5
3,648,893	+				+2.3
3,648,893	+				+0.0
3,648,893	+				-0.8
3,648,895	+				-3.0
3,648,901	-				-2.1
3,648,901	-				-1.1
3,648,901	-				-1.4
3,648,901	-				+0.9
3,648,901	-				-1.2
3,648,903	-				+0.7
3,648,905	+				-1.6
3,648,906	-				-1.6
3,648,908	+				-0.7
3,648,908	+				-1.2
3,648,908	+				+0.0
3,648,916	-				-0.2
3,648,918	+				-1.0
3,648,921	-				-1.3
3,648,921	-				-2.3
3,648,926	-				+4.0
3,648,926	-				-0.9
3,648,931	-				+1.3
3,648,931	-				+1.8
3,648,931	-				+1.0
3,648,935	+				+0.5
3,648,936	-				+2.3
3,649,111	+				-0.7
3,649,900	-	yhiS	b3504	0.79	+4.8
3,649,974	-	yhiS	b3504	0.89	+3.3
3,649,979	-	yhiS	b3504	0.90	+3.3
3,649,979	-	yhiS	b3504	0.90	+3.3
3,649,980	-	yhiS	b3504	0.90	+2.3
3,649,984	-				-0.5
3,649,984	-				-0.9
3,649,990	-				+0.5
3,649,990	-				+2.3