Strain Fitness in Escherichia coli BW25113 around b3120

Experiment: Ying_Others16 rep A; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep A; time point 2
3,264,881	+	tdcA	b3118	0.78	+1.2
3,264,903	-	tdcA	b3118	0.80	+3.3
3,264,979	-	tdcA	b3118	0.88	-1.2
3,264,994	-				-0.6
3,265,039	+				+2.3
3,265,044	-				-1.0
3,265,047	-				+0.5
3,265,047	-				-0.0
3,265,054	-				+1.9
3,265,055	-				+0.5
3,265,058	-				+2.3
3,265,544	-	tdcR	b3119	0.65	-0.7
3,265,544	-	tdcR	b3119	0.65	+1.5
3,265,594	-	tdcR	b3119	0.88	+0.4
3,265,658	-				+0.2
3,265,658	-				-0.4
3,265,671	-				+0.8
3,265,673	+				+0.1
3,265,698	+				-1.6
3,265,702	-				-0.8
3,265,708	-				+0.7
3,265,708	-				+1.5
3,265,743	-				-0.4
3,265,743	-				-0.6
3,265,745	+				+0.6
3,265,746	+				+1.0
3,265,746	+				-0.7
3,265,746	+				+1.6
3,265,746	+				-0.1
3,265,746	+				+1.5
3,265,751	+				+0.5
3,265,751	+				+0.9
3,265,751	+				+0.5
3,265,754	-				-1.3
3,265,758	+				+1.2
3,265,759	-				-0.1
3,265,759	-				+1.7
3,265,759	-				+2.7
3,265,763	-				+4.2
3,265,763	-				+3.3
3,265,768	-				-1.0
3,265,778	-				+2.7
3,265,778	-				-1.2
3,265,798	+				-0.1
3,265,798	+				+0.0
3,265,798	+				-1.5
3,265,806	-				+1.3
3,265,842	+				-1.1
3,265,881	-				+3.3
3,265,914	+				+0.5
3,265,914	+				-2.0
3,266,009	-	yhaB	b3120	0.25	+3.3
3,266,085	-	yhaB	b3120	0.39	+3.3
3,266,231	-	yhaB	b3120	0.66	+1.7
3,266,231	-				-0.3
3,266,324	+	yhaB	b3120	0.83	-0.0
3,266,326	+	yhaB	b3120	0.83	+0.3
3,266,334	+	yhaB	b3120	0.85	+3.3
3,266,334	+	yhaB	b3120	0.85	+3.3
3,266,895	+	yhaC	b3121	0.39	+3.3
3,266,905	+	yhaC	b3121	0.39	+3.3