Strain Fitness in Escherichia coli BW25113 around b2876

Experiment: Ying_Others16 rep A; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep A; time point 2
3,011,418	-	yqeB	b2875	0.48	+0.1
3,011,469	+	yqeB	b2875	0.51	+0.3
3,011,537	+	yqeB	b2875	0.55	+0.3
3,011,560	+	yqeB	b2875	0.57	-0.1
3,011,597	-	yqeB	b2875	0.59	-0.0
3,011,616	-	yqeB	b2875	0.60	+1.7
3,011,706	-	yqeB	b2875	0.66	+0.4
3,011,918	-	yqeB	b2875	0.79	-0.0
3,011,918	-	yqeB	b2875	0.79	-0.8
3,011,971	+	yqeB	b2875	0.82	+1.4
3,012,000	-	yqeB	b2875	0.84	-3.6
3,012,020	-				-1.4
3,012,020	-	yqeB	b2875	0.85	-1.4
3,012,022	+	yqeB	b2875	0.85	+0.4
3,012,079	-	yqeB	b2875	0.89	+0.9
3,012,079	-	yqeB	b2875	0.89	-1.4
3,012,102	-				+0.7
3,012,147	-				+0.1
3,012,283	-				-1.0
3,012,304	+				-0.9
3,012,378	+				+0.9
3,012,497	-	b2876	b2876	0.24	+1.4
3,012,666	-	b2876	b2876	0.46	+0.3
3,012,666	-	b2876	b2876	0.46	+0.7
3,012,715	+	b2876	b2876	0.53	+0.2
3,012,848	+	b2876	b2876	0.70	+0.5
3,012,888	+	b2876	b2876	0.75	-1.9
3,012,888	+	b2876	b2876	0.75	+1.8
3,012,939	+	b2876	b2876	0.82	+0.6
3,012,947	-	b2876	b2876	0.83	+0.8
3,012,954	+	b2876	b2876	0.84	+0.3
3,013,010	+				+0.6
3,013,010	+				+0.5
3,013,012	-				+0.1
3,013,012	-				-1.1
3,013,026	+				-0.6
3,013,047	+				+0.2
3,013,047	+				+0.8
3,013,052	+				-1.3
3,013,052	+				+0.5
3,013,084	+				+0.1
3,013,121	+				+0.5
3,013,124	-				-0.1
3,013,125	+				-0.8
3,013,138	+				+0.5
3,013,139	+				+0.8
3,013,156	-				-0.4
3,013,166	+				-1.7
3,013,169	-				-0.8
3,013,177	+				+0.2
3,013,177	+				-2.2
3,013,184	+				-0.1
3,013,196	-				-0.5
3,013,198	+				-0.9
3,013,203	-				-0.4
3,013,228	-				-0.4
3,013,228	-				-1.6
3,013,236	-				+0.1
3,013,238	+				+0.1
3,013,241	+	ygfJ	b2877	0.10	-0.6
3,013,242	+	ygfJ	b2877	0.10	-0.5
3,013,248	-	ygfJ	b2877	0.11	+1.4
3,013,253	+	ygfJ	b2877	0.12	-1.8
3,013,253	+	ygfJ	b2877	0.12	-2.9
3,013,254	+	ygfJ	b2877	0.12	+0.1
3,013,254	+	ygfJ	b2877	0.12	-1.2
3,013,254	+	ygfJ	b2877	0.12	+0.1
3,013,256	-	ygfJ	b2877	0.13	-1.5
3,013,272	+	ygfJ	b2877	0.16	+0.9
3,013,286	+	ygfJ	b2877	0.18	+0.1
3,013,333	+	ygfJ	b2877	0.26	+0.6
3,013,342	+	ygfJ	b2877	0.28	+3.2
3,013,342	+	ygfJ	b2877	0.28	+0.9
3,013,342	+	ygfJ	b2877	0.28	+0.1
3,013,342	+	ygfJ	b2877	0.28	+0.1
3,013,342	+	ygfJ	b2877	0.28	+1.2
3,013,342	+	ygfJ	b2877	0.28	+0.4
3,013,347	+	ygfJ	b2877	0.28	+0.1
3,013,350	+	ygfJ	b2877	0.29	+2.2
3,013,350	+	ygfJ	b2877	0.29	+0.9
3,013,350	-	ygfJ	b2877	0.29	+2.2
3,013,350	-	ygfJ	b2877	0.29	+1.0
3,013,350	-	ygfJ	b2877	0.29	+0.2
3,013,350	-	ygfJ	b2877	0.29	+4.2
3,013,350	-	ygfJ	b2877	0.29	+4.1
3,013,350	-	ygfJ	b2877	0.29	+1.1
3,013,353	+	ygfJ	b2877	0.30	+2.2
3,013,357	+	ygfJ	b2877	0.30	+2.6
3,013,357	+	ygfJ	b2877	0.30	+1.1
3,013,376	-	ygfJ	b2877	0.34	-0.6
3,013,384	-	ygfJ	b2877	0.35	+1.2
3,013,404	-	ygfJ	b2877	0.38	-1.8
3,013,412	+	ygfJ	b2877	0.40	+0.2
3,013,412	+	ygfJ	b2877	0.40	+1.2
3,013,412	+	ygfJ	b2877	0.40	+2.2
3,013,413	+	ygfJ	b2877	0.40	-0.6
3,013,420	-	ygfJ	b2877	0.41	+0.6
3,013,423	+	ygfJ	b2877	0.42	+0.6
3,013,423	+	ygfJ	b2877	0.42	+0.4
3,013,423	+	ygfJ	b2877	0.42	-0.5
3,013,423	+	ygfJ	b2877	0.42	-0.3
3,013,423	+	ygfJ	b2877	0.42	+0.8
3,013,425	-	ygfJ	b2877	0.42	-2.2
3,013,427	-	ygfJ	b2877	0.42	-0.8
3,013,440	-	ygfJ	b2877	0.45	+0.1
3,013,449	-	ygfJ	b2877	0.46	+0.1
3,013,486	+	ygfJ	b2877	0.53	+0.6
3,013,486	+	ygfJ	b2877	0.53	+1.2
3,013,491	+	ygfJ	b2877	0.53	-0.7
3,013,545	+	ygfJ	b2877	0.63	+0.3
3,013,556	+	ygfJ	b2877	0.65	-0.6
3,013,557	+	ygfJ	b2877	0.65	-0.2
3,013,557	+	ygfJ	b2877	0.65	+0.0
3,013,558	+	ygfJ	b2877	0.65	+0.8
3,013,564	-	ygfJ	b2877	0.66	+1.1
3,013,585	-	ygfJ	b2877	0.70	-0.2
3,013,604	+	ygfJ	b2877	0.73	+1.0
3,013,604	+	ygfJ	b2877	0.73	-1.7
3,013,614	+	ygfJ	b2877	0.75	+0.7
3,013,615	+	ygfJ	b2877	0.75	+0.6
3,013,615	+	ygfJ	b2877	0.75	+0.3
3,013,621	+	ygfJ	b2877	0.76	+0.6
3,013,622	+	ygfJ	b2877	0.76	-1.0
3,013,622	+	ygfJ	b2877	0.76	+1.0
3,013,634	+	ygfJ	b2877	0.78	+1.0
3,013,636	+	ygfJ	b2877	0.78	-2.4
3,013,636	+	ygfJ	b2877	0.78	-3.5
3,013,636	+	ygfJ	b2877	0.78	+0.2
3,013,645	+	ygfJ	b2877	0.80	+0.6
3,013,645	-	ygfJ	b2877	0.80	+0.4
3,013,650	+	ygfJ	b2877	0.81	-0.4
3,013,652	+	ygfJ	b2877	0.81	-0.9
3,013,652	+	ygfJ	b2877	0.81	+1.3
3,013,652	+	ygfJ	b2877	0.81	+1.3
3,013,660	-	ygfJ	b2877	0.83	-0.1
3,013,732	-				-1.0
3,013,780	+				+0.2
3,013,813	+				+2.7
3,013,821	-				-2.3
3,013,904	+				+3.2
3,013,920	-				-0.2
3,013,920	-				+0.2
3,013,921	-				-0.5
3,013,921	-				+0.2
3,013,921	-				-0.4
3,013,921	-				+1.0
3,013,990	+				-1.2
3,013,991	-				+0.9
3,013,991	-				+0.3
3,014,001	-				-2.4
3,014,001	-				-0.5
3,014,004	+				+0.8
3,014,007	+				-0.1
3,014,007	+				-0.4
3,014,007	+				-0.5
3,014,010	-				-0.7
3,014,015	+				-0.8
3,014,015	+				+0.8
3,014,016	+				-1.5
3,014,016	+				-0.7
3,014,016	+				-0.3
3,014,016	+				+0.2
3,014,033	+				-1.0
3,014,052	+				+0.8
3,014,056	-				+2.4
3,014,056	-				-0.7
3,014,057	-				+0.4
3,014,057	-				-0.5
3,014,061	+				-1.1
3,014,061	+				-1.5
3,014,061	+				-0.1
3,014,061	+				+0.8
3,014,073	-				-0.5
3,014,073	-				+0.7
3,014,075	-				+1.2
3,014,075	-				+0.0
3,014,079	+				-0.2