Strain Fitness in Escherichia coli BW25113 around b2742

Experiment: Ying_Others16 rep A; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep A; time point 2
2,864,641	+				+3.3
2,864,656	-				+3.6
2,864,698	+	rpoS	b2741	0.12	+4.4
2,864,840	-				+3.0
2,864,866	+	rpoS	b2741	0.29	+4.3
2,864,925	+	rpoS	b2741	0.35	+4.1
2,864,925	+	rpoS	b2741	0.35	+3.2
2,865,021	+	rpoS	b2741	0.44	+4.3
2,865,037	+	rpoS	b2741	0.46	+3.9
2,865,044	+	rpoS	b2741	0.47	+2.8
2,865,047	-	rpoS	b2741	0.47	+4.5
2,865,085	-	rpoS	b2741	0.51	+4.3
2,865,116	-	rpoS	b2741	0.54	+4.5
2,865,175	+	rpoS	b2741	0.60	+2.9
2,865,190	+	rpoS	b2741	0.61	+4.4
2,865,195	+	rpoS	b2741	0.62	+4.4
2,865,198	-	rpoS	b2741	0.62	+4.4
2,865,376	-	rpoS	b2741	0.80	+5.0
2,865,389	+	rpoS	b2741	0.81	+4.5
2,865,415	+	rpoS	b2741	0.84	+3.7
2,865,447	-	rpoS	b2741	0.87	+4.4
2,865,490	-				+3.4
2,865,512	-				+3.1
2,865,598	-				+1.1
2,865,598	-				+0.8
2,865,764	-	nlpD	b2742	0.11	+0.8
2,865,788	+	nlpD	b2742	0.13	+3.0
2,865,788	+	nlpD	b2742	0.13	+2.9
2,865,805	-	nlpD	b2742	0.15	+0.0
2,865,817	-	nlpD	b2742	0.16	+0.0
2,865,867	+	nlpD	b2742	0.20	+1.8
2,866,116	+	nlpD	b2742	0.42	+1.3
2,866,116	+	nlpD	b2742	0.42	+2.5
2,866,149	+	nlpD	b2742	0.45	+1.9
2,866,172	+	nlpD	b2742	0.47	+0.8
2,866,210	+	nlpD	b2742	0.50	+1.4
2,866,212	+	nlpD	b2742	0.51	+0.6
2,866,265	-	nlpD	b2742	0.55	+0.3
2,866,380	+	nlpD	b2742	0.65	+0.7
2,866,380	+	nlpD	b2742	0.65	+0.2
2,866,414	-	nlpD	b2742	0.68	+1.4
2,866,414	-	nlpD	b2742	0.68	+1.4
2,866,436	+	nlpD	b2742	0.70	-0.3
2,866,441	+	nlpD	b2742	0.71	+0.5
2,866,463	-	nlpD	b2742	0.73	+0.6
2,866,463	-	nlpD	b2742	0.73	-0.3
2,866,511	-	nlpD	b2742	0.77	+1.3
2,866,511	-	nlpD	b2742	0.77	+0.8
2,866,658	+	nlpD	b2742	0.90	-1.1
2,866,722	-				+0.8
2,866,836	-				-2.0
2,866,998	+	pcm	b2743	0.13	+0.0
2,867,354	+	pcm	b2743	0.70	-0.6
2,867,354	+	pcm	b2743	0.70	+1.1
2,867,354	+	pcm	b2743	0.70	-0.7
2,867,354	+	pcm	b2743	0.70	+0.6
2,867,354	+	pcm	b2743	0.70	-0.7
2,867,359	-	pcm	b2743	0.71	+0.1
2,867,541	-				-0.5
2,867,541	-				-0.2
2,867,616	-	surE	b2744	0.11	-2.0
2,867,623	+	surE	b2744	0.12	+0.2
2,867,631	+	surE	b2744	0.13	-2.4
2,867,672	-	surE	b2744	0.18	-1.3
2,867,701	+	surE	b2744	0.22	+0.8
2,867,709	-	surE	b2744	0.23	+0.1
2,867,747	+	surE	b2744	0.28	+1.0
2,867,747	+	surE	b2744	0.28	+0.9