Strain Fitness in Escherichia coli BW25113 around b2517

Experiment: Ying_Others16 rep A; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep A; time point 2
2,640,158	+	yfgA	b2516	0.30	+1.0
2,640,262	-	yfgA	b2516	0.40	+0.8
2,640,262	-	yfgA	b2516	0.40	+0.3
2,640,310	+	yfgA	b2516	0.45	+1.3
2,640,315	-	yfgA	b2516	0.46	+1.1
2,640,336	+	yfgA	b2516	0.48	+0.7
2,640,336	+	yfgA	b2516	0.48	+0.4
2,640,347	+	yfgA	b2516	0.49	+0.6
2,640,347	+	yfgA	b2516	0.49	+1.1
2,640,347	+	yfgA	b2516	0.49	+0.6
2,640,348	+	yfgA	b2516	0.49	+1.6
2,640,384	+	yfgA	b2516	0.52	+1.3
2,640,387	-	yfgA	b2516	0.53	-0.5
2,640,442	+	yfgA	b2516	0.58	+1.9
2,640,442	+	yfgA	b2516	0.58	-0.6
2,640,953	+				+0.9
2,640,955	+				+0.6
2,640,963	+				+0.6
2,640,963	+				-0.1
2,640,963	+				+0.1
2,640,963	+				-2.0
2,640,963	+				-1.1
2,640,963	+				+1.3
2,640,971	-				-0.5
2,640,971	-				+0.6
2,641,026	-				-0.3
2,641,028	+				+1.3
2,641,038	+				-0.2
2,641,046	-				-0.7
2,641,046	-				-1.1
2,641,046	-				-0.5
2,641,173	+				+0.4
2,641,179	+				-1.7
2,641,181	-				+0.5
2,641,181	-				-1.3
2,641,187	-				+0.2
2,641,279	+	yfgB	b2517	0.11	+0.6
2,641,279	+	yfgB	b2517	0.11	+1.0
2,641,299	-	yfgB	b2517	0.13	+0.2
2,641,344	+	yfgB	b2517	0.17	+1.4
2,641,397	-	yfgB	b2517	0.21	+0.4
2,641,453	-	yfgB	b2517	0.26	-0.0
2,641,453	-	yfgB	b2517	0.26	+0.5
2,641,671	+	yfgB	b2517	0.45	+0.4
2,641,688	+	yfgB	b2517	0.46	-0.3
2,641,748	+	yfgB	b2517	0.52	+1.6
2,641,748	+	yfgB	b2517	0.52	+1.2
2,641,784	-	yfgB	b2517	0.55	+1.7
2,641,819	+	yfgB	b2517	0.58	+0.3
2,641,819	+	yfgB	b2517	0.58	+1.5
2,641,923	-	yfgB	b2517	0.67	+0.3
2,641,947	+	yfgB	b2517	0.69	-0.5
2,641,947	+	yfgB	b2517	0.69	+1.6
2,642,153	-	yfgB	b2517	0.87	+0.9
2,642,153	-	yfgB	b2517	0.87	+0.1
2,642,304	-				+1.1
2,642,392	-				+0.0
2,642,392	-				+0.7
2,642,509	-	ndk	b2518	0.12	-0.5
2,642,509	-	ndk	b2518	0.12	-0.5
2,642,590	-	ndk	b2518	0.31	+0.7
2,642,592	+	ndk	b2518	0.32	+0.4
2,642,684	-				-0.2
2,642,740	-	ndk	b2518	0.66	-0.3
2,642,740	-	ndk	b2518	0.66	-1.4
2,642,809	+	ndk	b2518	0.82	+1.4
2,642,937	+				+0.3
2,643,036	-				+1.2
2,643,081	+				+0.5
2,643,131	-				+0.3
2,643,171	-				-0.7
2,643,235	-				-0.8
2,643,235	-				-2.9