Strain Fitness in Escherichia coli BW25113 around b1830

Experiment: Ying_Others16 rep A; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep A; time point 2
1,909,831	-	htpX	b1829	0.13	+0.6
1,909,831	-	htpX	b1829	0.13	-0.8
1,910,032	+	htpX	b1829	0.35	-1.0
1,910,119	+	htpX	b1829	0.45	+0.9
1,910,119	+	htpX	b1829	0.45	+1.4
1,910,121	+	htpX	b1829	0.46	-0.5
1,910,143	-	htpX	b1829	0.48	+0.6
1,910,228	-	htpX	b1829	0.58	+0.6
1,910,486	-	htpX	b1829	0.87	-1.3
1,910,486	-	htpX	b1829	0.87	-1.3
1,910,624	+				+0.1
1,910,643	+				-1.4
1,910,686	+				+0.3
1,910,686	+				-0.4
1,910,877	-				+1.7
1,910,898	-				+2.6
1,911,010	-				+2.5
1,911,068	+	prc	b1830	0.13	+1.9
1,911,197	-	prc	b1830	0.20	+2.2
1,911,283	+	prc	b1830	0.24	+1.6
1,911,318	+	prc	b1830	0.26	+0.8
1,911,341	-	prc	b1830	0.27	-1.9
1,911,341	-	prc	b1830	0.27	-1.6
1,911,400	-	prc	b1830	0.30	+1.3
1,911,400	-	prc	b1830	0.30	-0.5
1,911,511	-	prc	b1830	0.35	+1.1
1,911,511	-	prc	b1830	0.35	+1.5
1,911,530	-	prc	b1830	0.36	+0.1
1,911,546	-	prc	b1830	0.37	+1.7
1,911,546	-	prc	b1830	0.37	+0.2
1,911,606	+	prc	b1830	0.40	+0.8
1,911,651	+	prc	b1830	0.42	-0.9
1,911,749	-	prc	b1830	0.47	+1.9
1,911,749	-	prc	b1830	0.47	+2.0
1,911,847	+	prc	b1830	0.51	-1.1
1,911,847	+	prc	b1830	0.51	+2.4
1,912,082	+	prc	b1830	0.63	+1.6
1,912,123	-	prc	b1830	0.65	+1.8
1,912,140	+	prc	b1830	0.66	-1.5
1,912,140	+	prc	b1830	0.66	+1.0
1,912,166	+	prc	b1830	0.67	+1.1
1,912,166	+	prc	b1830	0.67	+1.5
1,912,759	+				+1.4
1,912,759	+				+1.2
1,912,794	-				+0.1
1,912,972	+	proQ	b1831	0.16	+3.9
1,912,972	+	proQ	b1831	0.16	+4.5
1,913,231	-	proQ	b1831	0.53	+2.6
1,913,263	-	proQ	b1831	0.58	+3.5
1,913,263	-	proQ	b1831	0.58	+4.1
1,913,405	+	proQ	b1831	0.78	+4.4
1,913,405	+	proQ	b1831	0.78	+3.5
1,913,413	-	proQ	b1831	0.79	+2.7
1,913,725	-	yebR	b1832	0.14	-0.3
1,913,752	+	yebR	b1832	0.19	-0.1
1,913,752	+	yebR	b1832	0.19	+1.2
1,913,760	-	yebR	b1832	0.21	-0.4
1,913,790	-	yebR	b1832	0.27	-1.7
1,913,790	-	yebR	b1832	0.27	-1.5