Strain Fitness in Escherichia coli BW25113 around b1694

Experiment: Ying_Others16 rep A; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep A; time point 2
1,772,623	-				+0.5
1,772,623	-				-0.4
1,772,882	-	aroD	b1693	0.23	-1.9
1,772,959	+	aroD	b1693	0.33	+2.2
1,772,959	+	aroD	b1693	0.33	-0.7
1,773,012	-	aroD	b1693	0.40	-1.3
1,773,094	+	aroD	b1693	0.51	-1.4
1,773,094	+	aroD	b1693	0.51	-2.4
1,773,181	-	aroD	b1693	0.62	-4.0
1,773,181	-	aroD	b1693	0.62	-3.0
1,773,228	-	aroD	b1693	0.68	-2.1
1,773,239	+	aroD	b1693	0.70	-1.1
1,773,247	-	aroD	b1693	0.71	-2.0
1,773,247	-	aroD	b1693	0.71	-1.7
1,773,271	+	aroD	b1693	0.74	-0.6
1,773,272	+	aroD	b1693	0.74	+0.2
1,773,279	-	aroD	b1693	0.75	+2.8
1,773,291	+	aroD	b1693	0.77	-0.7
1,773,440	+				+1.1
1,773,440	+				-1.8
1,773,442	+				+0.6
1,773,442	+				-0.5
1,773,641	-				+0.5
1,773,665	-				-1.7
1,773,973	+	ydiF	b1694	0.23	+2.8
1,773,983	-	ydiF	b1694	0.23	-0.4
1,774,006	+	ydiF	b1694	0.25	+1.2
1,774,006	+	ydiF	b1694	0.25	+1.3
1,774,006	+	ydiF	b1694	0.25	+0.9
1,774,013	-	ydiF	b1694	0.25	+2.2
1,774,014	-	ydiF	b1694	0.25	+0.2
1,774,086	+	ydiF	b1694	0.30	+2.3
1,774,095	+	ydiF	b1694	0.30	-0.0
1,774,138	-	ydiF	b1694	0.33	+0.2
1,774,157	-	ydiF	b1694	0.34	+4.2
1,774,182	-	ydiF	b1694	0.36	+0.3
1,774,239	-	ydiF	b1694	0.39	+2.0
1,774,251	-	ydiF	b1694	0.40	+0.8
1,774,261	-	ydiF	b1694	0.41	-2.5
1,774,368	+	ydiF	b1694	0.47	-1.7
1,774,392	-	ydiF	b1694	0.49	-1.5
1,774,449	+	ydiF	b1694	0.53	+0.3
1,774,459	+	ydiF	b1694	0.53	+0.4
1,774,551	+	ydiF	b1694	0.59	+0.7
1,774,551	+	ydiF	b1694	0.59	+0.4
1,774,552	-	ydiF	b1694	0.59	-0.0
1,774,559	-	ydiF	b1694	0.59	+2.8
1,774,559	-	ydiF	b1694	0.59	+0.5
1,774,571	+	ydiF	b1694	0.60	-0.2
1,774,603	+	ydiF	b1694	0.62	+1.9
1,774,660	+	ydiF	b1694	0.66	+0.4
1,774,660	+	ydiF	b1694	0.66	-2.2
1,774,759	+	ydiF	b1694	0.72	+1.3
1,774,759	+	ydiF	b1694	0.72	+0.8
1,774,762	+	ydiF	b1694	0.72	-0.1
1,774,762	+	ydiF	b1694	0.72	-1.0
1,774,762	+	ydiF	b1694	0.72	+0.2
1,775,186	-				+1.8
1,775,201	+				+1.8
1,775,325	-				+0.8
1,775,334	-				+0.2
1,775,404	-	b1695	b1695	0.16	+0.8
1,775,404	-	b1695	b1695	0.16	+0.5
1,775,427	-	b1695	b1695	0.18	-0.5
1,775,581	-	b1695	b1695	0.31	+0.1
1,775,657	+	b1695	b1695	0.38	+0.6
1,775,858	-	b1695	b1695	0.55	+0.6
1,776,002	+	b1695	b1695	0.68	+0.0
1,776,174	+	b1695	b1695	0.83	+0.4
1,776,176	+	b1695	b1695	0.83	-0.9