Strain Fitness in Escherichia coli BW25113 around b1370
Experiment: Ying_Others16 rep A; time point 2
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Ying_Others16 rep A; time point 2 |
---|---|---|---|---|---|
remove | |||||
1,424,862 | - | ynaA | b1368 | 0.41 | +1.4 |
1,424,862 | - | ynaA | b1368 | 0.41 | -1.4 |
1,424,869 | - | ynaA | b1368 | 0.42 | -1.0 |
1,425,045 | + | ynaA | b1368 | 0.61 | +1.2 |
1,425,045 | + | ynaA | b1368 | 0.61 | +2.8 |
1,425,060 | + | ynaA | b1368 | 0.62 | +2.0 |
1,425,178 | + | ynaA | b1368 | 0.75 | -0.7 |
1,425,321 | - | -1.0 | |||
1,425,377 | - | -1.2 | |||
1,425,377 | - | -0.9 | |||
1,425,496 | + | lomR | b4570 | 0.40 | +1.1 |
1,425,548 | + | lomR | b4570 | 0.64 | +1.3 |
1,425,574 | - | lomR | b4570 | 0.77 | +0.4 |
1,426,405 | + | insH-5 | b1370 | 0.65 | +0.8 |
1,426,456 | - | insH-5 | b1370 | 0.70 | +0.7 |
1,426,658 | + | +0.2 | |||
1,426,658 | + | +0.5 | |||
1,426,738 | + | +0.5 | |||
1,426,738 | + | +1.6 | |||
1,426,746 | + | +1.8 | |||
1,426,877 | + | -0.9 | |||
1,426,954 | - | -0.2 | |||
1,426,954 | - | +0.5 | |||
1,427,144 | - | -0.6 | |||
1,427,251 | - | +0.8 |
Or see this region's nucleotide sequence