Strain Fitness in Escherichia coli BW25113 around b1346

Experiment: Ying_Others16 rep A; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep A; time point 2
1,410,339	+	intR	b1345	0.25	-1.1
1,410,339	+	intR	b1345	0.25	-0.3
1,410,394	+	intR	b1345	0.30	-0.3
1,410,422	-	intR	b1345	0.32	+1.0
1,410,426	+	intR	b1345	0.33	-0.2
1,410,436	-	intR	b1345	0.33	+0.1
1,410,440	-	intR	b1345	0.34	-0.6
1,410,533	+	intR	b1345	0.41	-0.6
1,410,538	+	intR	b1345	0.42	-1.3
1,410,543	+	intR	b1345	0.42	-0.6
1,410,543	+	intR	b1345	0.42	-0.6
1,410,560	-	intR	b1345	0.43	+0.1
1,410,560	-	intR	b1345	0.43	+0.5
1,410,626	+	intR	b1345	0.49	-0.9
1,410,723	-	intR	b1345	0.57	+0.5
1,410,761	+	intR	b1345	0.60	-0.4
1,410,788	+	intR	b1345	0.62	+0.5
1,410,843	-	intR	b1345	0.66	+2.8
1,410,879	+	intR	b1345	0.69	+1.2
1,411,223	-				-0.4
1,411,308	-	ydaQ	b1346	0.22	+0.9
1,411,308	-	ydaQ	b1346	0.22	+2.4
1,411,364	+	ydaQ	b1346	0.48	+1.3
1,411,483	+				+3.4
1,411,483	+				-2.1
1,411,534	+				+1.2
1,411,637	-	ydaC	b1347	0.39	+0.8
1,411,696	-	ydaC	b1347	0.67	+2.8
1,411,844	-	lar	b1348	0.45	-0.1
1,411,855	-	lar	b1348	0.50	+0.4
1,411,865	-	lar	b1348	0.55	+1.1
1,411,865	-	lar	b1348	0.55	+1.2
1,411,867	-	lar	b1348	0.56	+1.3
1,411,880	-	lar	b1348	0.63	+0.9
1,411,880	-	lar	b1348	0.63	-0.2
1,412,066	-				-0.5
1,412,069	-				-0.1
1,412,069	-				+1.0
1,412,080	-				+0.8
1,412,090	-	recT	b1349	0.10	+0.9
1,412,103	-	recT	b1349	0.12	+0.5
1,412,103	-	recT	b1349	0.12	-0.3
1,412,113	-	recT	b1349	0.13	+0.4
1,412,192	-	recT	b1349	0.23	+0.3
1,412,213	-	recT	b1349	0.25	+0.9
1,412,213	-	recT	b1349	0.25	-0.7
1,412,235	-	recT	b1349	0.28	-0.9
1,412,302	-	recT	b1349	0.36	-0.4
1,412,302	-	recT	b1349	0.36	-0.7