Strain Fitness in Escherichia coli BW25113 around b1221

Experiment: Ying_Others16 rep A; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep A; time point 2
1,273,463	+	ychO	b1220	0.33	+0.9
1,273,493	+	ychO	b1220	0.35	+1.0
1,273,732	+	ychO	b1220	0.52	-0.6
1,273,737	+	ychO	b1220	0.52	-0.1
1,273,930	-	ychO	b1220	0.66	+0.8
1,274,003	+	ychO	b1220	0.71	-0.4
1,274,343	-				+0.4
1,274,391	+				+0.2
1,274,489	-	narL	b1221	0.13	-1.9
1,274,543	+	narL	b1221	0.22	+0.1
1,274,543	+	narL	b1221	0.22	+0.3
1,274,583	-	narL	b1221	0.28	+0.7
1,274,668	-	narL	b1221	0.41	-0.9
1,274,677	-	narL	b1221	0.42	+0.5
1,274,677	-	narL	b1221	0.42	+0.7
1,275,022	+				-3.7
1,275,022	+				-0.0
1,275,035	-				+0.6
1,275,035	-				+0.1
1,275,476	+	narX	b1222	0.24	+1.1
1,275,525	+	narX	b1222	0.27	+0.7
1,275,525	+	narX	b1222	0.27	+0.5
1,275,784	-	narX	b1222	0.41	+4.7
1,275,905	-	narX	b1222	0.48	+2.6
1,275,905	-	narX	b1222	0.48	+1.6