Strain Fitness in Escherichia coli BW25113 around b0050

Experiment: Ying_Others16 rep A; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep A; time point 2
50,361	+				+1.0
50,361	+				-0.9
50,370	-				-1.4
50,376	+				+0.3
50,461	+				-1.2
50,469	-	apaH	b0049	0.11	+1.9
50,501	+	apaH	b0049	0.14	-0.8
50,507	-	apaH	b0049	0.15	-1.2
50,568	-	apaH	b0049	0.22	-1.0
50,717	-	apaH	b0049	0.40	+0.5
50,785	-	apaH	b0049	0.48	-1.2
50,791	+	apaH	b0049	0.49	-0.3
50,802	+	apaH	b0049	0.50	-2.2
50,829	-	apaH	b0049	0.53	+2.0
50,859	-	apaH	b0049	0.57	-1.2
50,877	+	apaH	b0049	0.59	+0.2
51,025	+	apaH	b0049	0.77	+0.4
51,109	-	apaH	b0049	0.86	-3.1
51,177	+				-1.0
51,177	+				-0.5
51,185	-				-2.1
51,190	+				-2.3
51,190	+				-2.1
51,240	+				+0.4
51,240	+				+2.0
51,311	+	apaG	b0050	0.22	+1.0
51,311	+	apaG	b0050	0.22	+0.3
51,322	-	apaG	b0050	0.25	-0.9
51,326	-	apaG	b0050	0.26	+0.9
51,334	-	apaG	b0050	0.28	+0.5
51,336	-	apaG	b0050	0.28	+2.0
51,353	+	apaG	b0050	0.33	+2.2
51,353	+	apaG	b0050	0.33	+0.9
51,353	-	apaG	b0050	0.33	+1.1
51,364	-	apaG	b0050	0.36	+0.8
51,372	-	apaG	b0050	0.38	+1.2
51,415	+	apaG	b0050	0.49	+0.5
51,423	-	apaG	b0050	0.51	+0.8
51,466	+	apaG	b0050	0.63	+0.5
51,472	+	apaG	b0050	0.64	+0.1
51,512	-	apaG	b0050	0.75	+1.6
51,514	-	apaG	b0050	0.75	+0.0
51,520	-	apaG	b0050	0.77	+0.8
51,524	+	apaG	b0050	0.78	-0.3
51,550	-	apaG	b0050	0.85	+1.6
51,560	+	apaG	b0050	0.88	+0.1
51,567	-	apaG	b0050	0.89	-0.1
51,567	-	apaG	b0050	0.89	+1.2
51,576	+				+0.9
51,576	+				+0.5
51,586	-				+1.4
51,613	+				-0.4
51,614	-				-0.2
51,615	+				-0.2
51,615	+				+1.1
51,673	-				+1.6
51,703	+	ksgA	b0051	0.11	+0.6
51,703	+	ksgA	b0051	0.11	+2.1
51,812	-	ksgA	b0051	0.25	+2.8
51,836	+	ksgA	b0051	0.28	+1.3
51,891	-	ksgA	b0051	0.34	+3.5
51,891	-	ksgA	b0051	0.34	+0.6
51,904	+	ksgA	b0051	0.36	+1.7
51,906	+	ksgA	b0051	0.36	+1.1
51,925	-	ksgA	b0051	0.38	+0.8
52,040	+	ksgA	b0051	0.52	+2.6
52,040	+	ksgA	b0051	0.52	-1.9
52,040	+	ksgA	b0051	0.52	+3.2
52,042	+	ksgA	b0051	0.53	+2.5
52,042	+	ksgA	b0051	0.53	+2.6
52,042	+	ksgA	b0051	0.53	+2.3
52,042	-	ksgA	b0051	0.53	+3.2
52,042	-	ksgA	b0051	0.53	+2.0
52,045	+	ksgA	b0051	0.53	+0.4
52,062	+	ksgA	b0051	0.55	+2.3
52,062	+				+2.9
52,070	-	ksgA	b0051	0.56	+2.4
52,072	+	ksgA	b0051	0.56	+2.1
52,089	-	ksgA	b0051	0.58	+1.3
52,276	+	ksgA	b0051	0.81	+3.1
52,276	+	ksgA	b0051	0.81	+1.6
52,284	+	ksgA	b0051	0.82	+1.6
52,338	+	ksgA	b0051	0.89	-0.7
52,338	+	ksgA	b0051	0.89	+0.9
52,343	-	ksgA	b0051	0.89	-0.1
52,348	-				+1.4
52,348	-				-0.1
52,348	-				+2.0
52,354	+				+2.1
52,420	-				+3.0
52,490	+				+0.1
52,490	+				-0.4
52,502	+				-1.9
52,502	+				-0.9
52,518	-				+0.2
52,518	-				-0.1