Strain Fitness in Escherichia coli BW25113 around b4602
Experiment: Ying_Nucleobase14 rep C; time point 2
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Ying_Nucleobase14 rep C; time point 2 |
---|---|---|---|---|---|
remove | |||||
1,734,590 | - | ydhP | b1657 | 0.38 | -0.0 |
1,734,609 | + | ydhP | b1657 | 0.40 | +0.4 |
1,734,686 | + | ydhP | b1657 | 0.46 | +0.3 |
1,734,726 | - | ydhP | b1657 | 0.50 | +0.1 |
1,734,906 | - | ydhP | b1657 | 0.65 | -0.2 |
1,734,939 | - | ydhP | b1657 | 0.68 | +0.2 |
1,735,214 | - | -0.8 | |||
1,735,316 | + | +0.9 | |||
1,735,660 | - | -0.9 | |||
1,735,660 | - | -0.7 | |||
1,735,783 | + | +1.6 | |||
1,735,783 | + | +0.8 | |||
1,735,791 | - | -1.6 | |||
1,736,132 | + | purR | b1658 | 0.26 | -0.8 |
1,736,147 | - | purR | b1658 | 0.27 | -2.3 |
1,736,235 | - | purR | b1658 | 0.36 | -1.6 |
1,736,243 | - | purR | b1658 | 0.37 | -0.7 |
1,736,255 | + | purR | b1658 | 0.38 | -0.0 |
1,736,255 | + | purR | b1658 | 0.38 | +0.0 |
1,736,297 | + | purR | b1658 | 0.42 | -1.1 |
1,736,319 | + | purR | b1658 | 0.44 | -1.7 |
1,736,347 | - | purR | b1658 | 0.47 | -0.9 |
1,736,506 | + | purR | b1658 | 0.62 | -0.6 |
1,736,506 | + | purR | b1658 | 0.62 | -2.4 |
Or see this region's nucleotide sequence