Strain Fitness in Escherichia coli BW25113 around b4647

Experiment: Ying_Nucleobase14 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Nucleobase14 rep B; time point 2
3,717,475	-				+0.6
3,717,480	-				+0.2
3,717,480	-				+0.6
3,717,484	+				+0.9
3,717,536	-	yiaG	b3555	0.12	-1.4
3,717,536	-	yiaG	b3555	0.12	-0.7
3,717,536	-	yiaG	b3555	0.12	-0.5
3,717,602	-	yiaG	b3555	0.35	-0.2
3,717,602	-	yiaG	b3555	0.35	-0.0
3,717,786	+				+0.3
3,717,805	+				+0.7
3,717,908	+				-0.0
3,717,914	-				+0.7
3,718,170	+				-0.3
3,718,267	+				+0.5
3,718,419	+				-0.5
3,718,476	-				-0.1
3,718,506	+				+1.8
3,718,507	+				+2.8
3,718,507	+				+1.8
3,718,507	+				+0.5
3,718,507	+				+1.8
3,718,514	-				-0.3
3,718,514	-				+0.6
3,718,514	-				+0.5
3,718,515	-				+0.1
3,718,515	-				-0.3
3,718,515	-				-0.7
3,718,516	-				-0.5
3,718,555	-				-0.3
3,718,555	-				-0.1
3,718,567	+				+0.5
3,718,624	+	mokA	b4647	0.83	+2.8
3,718,624	+	mokA	b4647	0.83	+1.8
3,718,636	+	mokA	b4647	0.89	+0.5
3,718,636	+	mokA	b4647	0.89	+2.2
3,718,638	+				+0.8
3,718,652	+				-0.1
3,718,652	+				-0.8
3,718,652	+				+2.8
3,718,667	+				+0.3
3,718,668	+				-2.6
3,718,756	+	insJ	b3557	0.10	-0.3
3,718,756	+	insJ	b3557	0.10	+1.1
3,718,763	+	insJ	b3557	0.11	+0.3
3,718,792	+	insJ	b3557	0.17	-1.4
3,718,794	+	insJ	b3557	0.17	+0.3
3,718,804	+	insJ	b3557	0.19	+1.1
3,718,821	+	insJ	b3557	0.23	+0.5
3,718,821	+	insJ	b3557	0.23	+0.1
3,718,827	+	insJ	b3557	0.24	-1.0
3,718,837	+				-1.0
3,718,936	+	insJ	b3557	0.45	+0.5
3,718,966	+	insJ	b3557	0.50	-0.1
3,718,966	+	insJ	b3557	0.50	+0.5
3,718,986	+	insJ	b3557	0.54	-1.8
3,719,018	+	insJ	b3557	0.60	+0.4
3,719,053	-	insJ	b3557	0.67	-0.5
3,719,105	+	insJ	b3557	0.77	+0.1
3,719,113	+	insJ	b3557	0.79	+0.4
3,719,266	+				+1.2
3,719,283	-				-0.2
3,719,334	+	insK	b3558	0.13	-0.5
3,719,337	+	insK	b3558	0.14	+0.3
3,719,337	+	insK	b3558	0.14	+1.1
3,719,337	+	insK	b3558	0.14	+0.6
3,719,337	+	insK	b3558	0.14	-1.4
3,719,400	-	insK	b3558	0.21	+0.4
3,719,408	-	insK	b3558	0.22	-0.8
3,719,408	-	insK	b3558	0.22	+0.3
3,719,408	-	insK	b3558	0.22	+0.4
3,719,413	-	insK	b3558	0.23	-0.1
3,719,431	-	insK	b3558	0.25	-0.6
3,719,431	-	insK	b3558	0.25	+0.2
3,719,445	+	insK	b3558	0.26	+0.1
3,719,466	+	insK	b3558	0.29	-0.5
3,719,476	-	insK	b3558	0.30	+0.0
3,719,493	+	insK	b3558	0.32	-0.1
3,719,499	+	insK	b3558	0.33	-0.3
3,719,512	-	insK	b3558	0.34	+0.5
3,719,514	+	insK	b3558	0.34	+1.6
3,719,514	+	insK	b3558	0.34	+0.0
3,719,520	-	insK	b3558	0.35	-1.0
3,719,520	-	insK	b3558	0.35	+0.2
3,719,522	+	insK	b3558	0.35	+0.2
3,719,531	-	insK	b3558	0.36	-0.7
3,719,531	-	insK	b3558	0.36	+0.1
3,719,531	-	insK	b3558	0.36	+0.7
3,719,533	+	insK	b3558	0.37	-0.6
3,719,533	+	insK	b3558	0.37	-3.0
3,719,535	-	insK	b3558	0.37	+0.3
3,719,543	+	insK	b3558	0.38	+0.4
3,719,545	+	insK	b3558	0.38	+0.3
3,719,570	+	insK	b3558	0.41	+0.2
3,719,570	+	insK	b3558	0.41	+0.1
3,719,584	+	insK	b3558	0.43	+1.0
3,719,611	+	insK	b3558	0.46	+0.2
3,719,637	+	insK	b3558	0.49	-0.6
3,719,648	+	insK	b3558	0.50	-0.1
3,719,648	+	insK	b3558	0.50	+0.9
3,719,650	+	insK	b3558	0.50	+1.2