Strain Fitness in Escherichia coli BW25113 around b2423

Experiment: Ying_Nucleobase14 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Nucleobase14 rep B; time point 2
2,537,849	+	cysA	b2422	0.10	-1.7
2,537,862	-	cysA	b2422	0.11	-1.2
2,537,903	-	cysA	b2422	0.15	-0.7
2,537,963	-	cysA	b2422	0.20	-1.9
2,538,033	+	cysA	b2422	0.27	-2.1
2,538,037	-	cysA	b2422	0.27	-1.7
2,538,054	-	cysA	b2422	0.29	-3.5
2,538,054	-	cysA	b2422	0.29	-1.9
2,538,084	-	cysA	b2422	0.31	-1.7
2,538,108	-	cysA	b2422	0.34	-2.1
2,538,114	+	cysA	b2422	0.34	-2.4
2,538,193	+	cysA	b2422	0.41	-2.8
2,538,193	+	cysA	b2422	0.41	-0.3
2,538,224	+	cysA	b2422	0.44	-2.7
2,538,224	+	cysA	b2422	0.44	-1.0
2,538,334	-	cysA	b2422	0.54	-4.4
2,538,334	-	cysA	b2422	0.54	-1.3
2,538,336	-	cysA	b2422	0.54	-0.8
2,538,699	+	cysA	b2422	0.87	-3.1
2,538,824	+				-0.8
2,538,824	+				-2.1
2,538,846	-				-1.3
2,538,846	-				-2.2
2,538,952	+	cysW	b2423	0.14	-0.5
2,538,952	+	cysW	b2423	0.14	-1.9
2,538,959	+	cysW	b2423	0.15	-3.3
2,538,961	+	cysW	b2423	0.15	-3.4
2,538,986	+	cysW	b2423	0.18	-3.9
2,539,072	+	cysW	b2423	0.28	-1.8
2,539,173	+	cysW	b2423	0.40	-3.0
2,539,173	+	cysW	b2423	0.40	-1.3
2,539,240	+	cysW	b2423	0.47	-1.5
2,539,249	-	cysW	b2423	0.48	-1.4
2,539,249	-	cysW	b2423	0.48	-1.2
2,539,456	+	cysW	b2423	0.72	-0.7
2,539,468	-	cysW	b2423	0.73	-0.4
2,539,468	-	cysW	b2423	0.73	-2.0
2,539,468	-	cysW	b2423	0.73	-2.4
2,539,694	-				-0.5
2,540,062	+	cysU	b2424	0.43	-2.2
2,540,110	-	cysU	b2424	0.49	-1.7
2,540,110	-	cysU	b2424	0.49	-1.5
2,540,129	+	cysU	b2424	0.51	-2.0
2,540,492	+				-2.3
2,540,535	+				-1.6
2,540,563	-				-1.1
2,540,677	-	cysP	b2425	0.14	+0.2
2,540,677	-	cysP	b2425	0.14	-0.3
2,540,695	-	cysP	b2425	0.16	+0.4