Strain Fitness in Escherichia coli BW25113 around b4375

Experiment: Ying_Nucleobase14 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Nucleobase14 rep B; time point 2
4,606,611	+				+0.6
4,606,636	-				+0.8
4,606,652	-				+1.0
4,606,655	-				+0.8
4,606,668	+				-0.3
4,606,724	+				+0.6
4,606,724	+				-0.6
4,606,733	+				-0.9
4,606,796	-	yjjG	b4374	0.19	-0.7
4,606,813	+	yjjG	b4374	0.21	+0.2
4,606,813	+	yjjG	b4374	0.21	-0.5
4,606,852	-	yjjG	b4374	0.27	-0.6
4,606,855	+	yjjG	b4374	0.27	-0.0
4,606,855	+	yjjG	b4374	0.27	-0.0
4,606,860	-	yjjG	b4374	0.28	+0.9
4,606,860	-	yjjG	b4374	0.28	+0.6
4,606,877	-	yjjG	b4374	0.31	-0.5
4,606,880	+	yjjG	b4374	0.31	-0.8
4,606,880	+	yjjG	b4374	0.31	+0.1
4,607,019	-	yjjG	b4374	0.52	-0.5
4,607,038	+	yjjG	b4374	0.54	-0.6
4,607,043	+	yjjG	b4374	0.55	+1.4
4,607,252	-	yjjG	b4374	0.86	+0.5
4,607,253	-	yjjG	b4374	0.86	-0.3
4,607,253	-	yjjG	b4374	0.86	+0.3
4,607,292	+				+0.0
4,607,292	+				+0.0
4,607,295	-				+0.3
4,607,295	-				+0.1
4,607,320	-				+0.0
4,607,320	-				+0.1
4,607,366	-				+0.1
4,607,416	+				+0.6
4,607,416	+				+0.4
4,607,460	-				-0.1
4,607,517	-				+0.2
4,607,517	-				+0.2
4,607,548	-				+1.7
4,607,562	+				+1.3
4,607,672	-	prfC	b4375	0.15	+0.8
4,607,694	+	prfC	b4375	0.16	-1.1
4,607,757	+	prfC	b4375	0.20	+2.4
4,607,757	+	prfC	b4375	0.20	+2.2
4,607,760	-	prfC	b4375	0.20	+1.4
4,607,789	-	prfC	b4375	0.22	+1.0
4,607,820	+	prfC	b4375	0.24	-0.0
4,607,867	-	prfC	b4375	0.27	+1.4
4,607,867	-	prfC	b4375	0.27	+0.4
4,607,898	+	prfC	b4375	0.29	+0.2
4,607,991	+	prfC	b4375	0.35	+0.8
4,608,026	-	prfC	b4375	0.37	+0.6
4,608,032	+	prfC	b4375	0.37	+1.5
4,608,112	-	prfC	b4375	0.42	+0.1
4,608,154	-	prfC	b4375	0.45	+1.5
4,608,185	+	prfC	b4375	0.47	+0.7
4,608,199	-	prfC	b4375	0.48	+1.4
4,608,201	+	prfC	b4375	0.48	+2.0
4,608,219	-	prfC	b4375	0.49	+0.4
4,608,279	+	prfC	b4375	0.53	+0.4
4,608,295	-	prfC	b4375	0.54	+1.8
4,608,299	+				+1.5
4,608,299	+	prfC	b4375	0.54	-1.2
4,608,361	-	prfC	b4375	0.58	+2.2
4,608,376	+	prfC	b4375	0.59	+1.4
4,608,435	+	prfC	b4375	0.63	-0.7
4,608,435	+	prfC	b4375	0.63	+0.8
4,608,443	+	prfC	b4375	0.63	+2.4
4,608,443	-	prfC	b4375	0.63	+0.4
4,608,443	-	prfC	b4375	0.63	+3.2
4,608,523	+	prfC	b4375	0.68	+1.4
4,608,551	-	prfC	b4375	0.70	+1.8
4,608,556	-	prfC	b4375	0.70	+1.0
4,608,577	-	prfC	b4375	0.72	+1.9
4,608,577	-	prfC	b4375	0.72	+1.3
4,608,579	+	prfC	b4375	0.72	+0.2
4,608,594	-	prfC	b4375	0.73	+2.0
4,608,612	-	prfC	b4375	0.74	+0.4
4,608,622	+	prfC	b4375	0.75	+1.5
4,608,639	-	prfC	b4375	0.76	-1.9
4,608,643	-	prfC	b4375	0.76	+0.3
4,608,650	-	prfC	b4375	0.76	-0.4
4,608,694	+	prfC	b4375	0.79	+3.0
4,608,766	-	prfC	b4375	0.84	+0.8
4,608,820	+	prfC	b4375	0.87	+1.6
4,608,862	-	prfC	b4375	0.90	+1.2
4,608,896	-				+1.2
4,609,031	+				+0.1
4,609,051	+				+1.0
4,609,196	+				-0.0
4,609,233	-				-0.9
4,609,258	+				+0.3
4,609,322	+				-0.6
4,609,322	-				+0.4
4,609,337	-				+0.2
4,609,339	+				-0.1
4,609,339	+				+0.5
4,609,354	+				+0.3
4,609,354	-				-0.6
4,609,408	-				+0.5
4,609,408	-				-0.2
4,609,611	-	osmY	b4376	0.32	-0.1
4,609,635	+	osmY	b4376	0.36	-0.4
4,609,635	+	osmY	b4376	0.36	+0.8
4,609,652	-	osmY	b4376	0.38	+0.2
4,609,680	+	osmY	b4376	0.43	+0.2
4,609,683	-	osmY	b4376	0.44	-0.3
4,609,714	-	osmY	b4376	0.49	+0.4
4,609,867	+	osmY	b4376	0.74	+0.7
4,609,914	+	osmY	b4376	0.82	+0.3
4,609,922	-				+0.4
4,609,977	+				-0.1
4,609,994	-				-0.1
4,609,994	-				+0.0